DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp74F and prph2b

DIOPT Version :10

Sequence 1:NP_524132.1 Gene:Tsp74F / 39995 FlyBaseID:FBgn0036769 Length:236 Species:Drosophila melanogaster
Sequence 2:NP_571642.1 Gene:prph2b / 559209 ZFINID:ZDB-GENE-000616-9 Length:342 Species:Danio rerio


Alignment Length:285 Identity:60/285 - (21%)
Similarity:95/285 - (33%) Gaps:117/285 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 GQFVKYSL-------------FIANFVIFVGGAIVFCLTLWTLVDRSFVNELLGTNLFSGAVY-- 60
            |.|:|..|             |:.|.:|.||  :|.|                |.|.|.|.|.  
Zfish    38 GIFLKIELRKRSEMMDNNESHFVPNLLILVG--LVAC----------------GVNTFGGKVCHD 84

  Fly    61 ---VLLVTSIIICLVSFL-GCVGAGKEVKCLLLTYFIIVALVFVTMLIGGVLGYVFRERVQQTMR 121
               .:..|.....|.::: |||     :.|::|         |||.|    |.::.:..:...:.
Zfish    85 SLDTVKFTKWKTMLKAYMSGCV-----IFCIVL---------FVTAL----LCFLMQISLHFALA 131

  Fly   122 QEMRSTMALY-----GSRREITQAWDLTQERLQCCGVDTWHDW-------NRY------------ 162
            :.:::.|..|     ..|..:.:..|:||...:|||.:.:.||       |||            
Zfish   132 EGLKNGMKYYKDTDTPGRCFMKRTLDMTQIEFRCCGNNNYKDWFEIQWISNRYLDFSNDEIKDRV 196

  Fly   163 ----------GPVPESCCQELFGGQRKECTIFPTIT---------------NLYNQGCLYVTTNF 202
                      ..||.|||..   |..:.| |...:|               |::.:||.....::
Zfish   197 QSNVEGKFLMDSVPFSCCNP---GSPRPC-IQHHLTNNSAHYSYDHHTEDLNVWTRGCREALVSY 257

  Fly   203 IRDHAAVIGG--TSIAVAILMIFGM 225
                   .||  .||...:|:...|
Zfish   258 -------YGGMMNSIGAFVLLFIIM 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp74FNP_524132.1 Tetraspanin 14..233 CDD:459767 58/282 (21%)
NET-5_like_LEL 110..207 CDD:239418 26/145 (18%)
prph2bNP_571642.1 Tetraspanin 16..>167 CDD:459767 35/164 (21%)
peripherin_like_LEL 120..262 CDD:239415 28/152 (18%)

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