DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp74F and tspan4b

DIOPT Version :10

Sequence 1:NP_524132.1 Gene:Tsp74F / 39995 FlyBaseID:FBgn0036769 Length:236 Species:Drosophila melanogaster
Sequence 2:NP_001076276.1 Gene:tspan4b / 556934 ZFINID:ZDB-GENE-070410-127 Length:232 Species:Danio rerio


Alignment Length:230 Identity:60/230 - (26%)
Similarity:113/230 - (49%) Gaps:17/230 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 CCGQFVKYSLFIANFVIFVGGAIVFCLTLWTLVDRSFVNELLGTNLFSGAVYVLLVTSIIICLVS 73
            ||   |||.:|:.|.:.::||..:|.:.:|....:|..:.|..:.....|..:|||...:..:..
Zfish     9 CC---VKYLMFVFNLIFWLGGCGLFGVGVWLAFTQSEFSSLPLSFPSLSAANLLLVAGGVTMVTG 70

  Fly    74 FLGCVGAGKEVKCLLLTYFIIVALVFVTMLIGGVLGYVFRERVQQTMRQEMRSTMALYGSRREIT 138
            ||||:||.||.||||||:|:|:.::.:|.::..::..::.|.:.:..:.::|..|..|.....:.
Zfish    71 FLGCLGALKEQKCLLLTFFVILLILVLTEVVLILVLSLYHEELDKKAKDDLREGMKGYSKNDGLR 135

  Fly   139 QAWDLTQERLQCCGVDT---WHDWNRYGPVPESCCQELFGGQRKECTIFPTITNLYNQGCLYVTT 200
            ::||..|...:||||..   ||:....|.:|.|||..           .|:....:.:.|.....
Zfish   136 KSWDNMQMIFKCCGVSNHTDWHNKTTDGKLPGSCCSN-----------DPSSCRHWEEPCYEKAK 189

  Fly   201 NFIRDHAAVIGGTSIAVAILMIFGMIFSCLLFNMI 235
            .::..:...:.|..:.:.|:.:..::||.|::..|
Zfish   190 QWLLTNITSVLGFGVCIGIVQLLALVFSMLMYCQI 224

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp74FNP_524132.1 Tetraspanin 14..233 CDD:459767 57/221 (26%)
NET-5_like_LEL 110..207 CDD:239418 20/99 (20%)
tspan4bNP_001076276.1 Tetraspanin 11..222 CDD:459767 57/221 (26%)
NET-5_like_LEL 108..196 CDD:239418 20/98 (20%)

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