DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp74F and tspan3

DIOPT Version :10

Sequence 1:NP_524132.1 Gene:Tsp74F / 39995 FlyBaseID:FBgn0036769 Length:236 Species:Drosophila melanogaster
Sequence 2:NP_001017023.1 Gene:tspan3 / 549777 XenbaseID:XB-GENE-868507 Length:253 Species:Xenopus tropicalis


Alignment Length:251 Identity:61/251 - (24%)
Similarity:109/251 - (43%) Gaps:44/251 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 MDCCGQFVKYSLFIANFVIFVGGAIVFC------LTLWTLVDRSFVNELLGTNLFSGAVYVLLVT 65
            |..||.....::.:...:||...|.:.|      ...:...|..|.:           ||.|:..
 Frog     1 MGQCGLISSKTVLVFLNLIFWAAAGILCYVGAYVFITYDDYDHFFED-----------VYTLIPG 54

  Fly    66 SIIIC------LVSFLGCVGAGKEVKCLLLTYFIIVALVFVTMLIGGVLGYVFRERVQQTMRQEM 124
            .|||.      ::..:||....:|.:|.|.|:.:|:.|||||.::..||||::|.:|:..:...:
 Frog    55 VIIIAAGTLLFIIGLIGCCATIRESRCGLATFVVILLLVFVTEVVVVVLGYIYRAKVEDEVDNTI 119

  Fly   125 RSTMALYG--SRREITQAWDLTQERLQCCGVDTWHDWN--------RYGPVPESCCQELF----G 175
            .:....|.  |....::|.|..|.:|.|||:|.:.||.        :...||.|||:...    |
 Frog   120 ANVFNQYNGISPDSASRAIDYVQRQLHCCGIDNYLDWENTPWFSEAKNNSVPLSCCRNYVFNCTG 184

  Fly   176 GQRKECTIFPTITNLYNQGCLYVTTNFIRDHAAVIGGTSIAVAILMIFGMIFSCLL 231
            ...|.       .:||::||..:....:::....:...::|.|.:.:.||:.:|::
 Frog   185 SMNKP-------GDLYSEGCKALVVEKLQEIMMYVIWAALAFAAIQLLGMLCACIV 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp74FNP_524132.1 Tetraspanin 14..233 CDD:459767 58/244 (24%)
NET-5_like_LEL 110..207 CDD:239418 26/110 (24%)
tspan3NP_001017023.1 Tetraspanin 9..235 CDD:459767 58/243 (24%)
TM4SF8_like_LEL 104..210 CDD:239416 27/112 (24%)

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