DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp74F and tspan4l

DIOPT Version :10

Sequence 1:NP_524132.1 Gene:Tsp74F / 39995 FlyBaseID:FBgn0036769 Length:236 Species:Drosophila melanogaster
Sequence 2:NP_001415142.1 Gene:tspan4l / 549038 XenbaseID:XB-GENE-958395 Length:237 Species:Xenopus tropicalis


Alignment Length:226 Identity:64/226 - (28%)
Similarity:115/226 - (50%) Gaps:9/226 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 CGQFVKYSLFIANFVIFVGGAIVFCLTLWTLVDRSFVNELLGTNLFSGAVYVLLVTSIIICLVSF 74
            |...:|.::||.|.:.::||..:..:.:|..|.:.....|..:.....|..:.:||..||.:|.|
 Frog     7 CLLCIKITMFIFNLIFWLGGCGILGVGVWLAVTQGKFATLSVSFPSLSAASLFMVTGSIIMVVGF 71

  Fly    75 LGCVGAGKEVKCLLLTYFIIVALVFVTMLIGGVLGYVFRERVQQTMRQEMRSTMALYGSRRE--I 137
            :||:||..|.:|||||:|:|:.::|:..:|...|...:.|:.....:::::..:.||.:...  :
 Frog    72 IGCLGAVTEHRCLLLTFFVILLIIFLLEMISMALFLTYTEQFHNYAQEDLKKGLQLYNTTGNLGL 136

  Fly   138 TQAWDLTQERLQCCGVDTWHDW-NRYGPVPESCCQELFGGQRKECTIFPTITNLYNQGCLYVTTN 201
            |.|||:.|...:||||....|| ...|.||.:||.|    ....|...|.:  .:.:.|.....|
 Frog   137 TNAWDIVQTEFRCCGVKNATDWLESKGSVPHTCCVE----HSPACKSNPKL--WWEEACYNKVRN 195

  Fly   202 FIRDHAAVIGGTSIAVAILMIFGMIFSCLLF 232
            ::..:...:|...|.:.::.:||:|||.|::
 Frog   196 WVESNIRSVGIFGICILVVQVFGLIFSMLMY 226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp74FNP_524132.1 Tetraspanin 14..233 CDD:459767 63/222 (28%)
NET-5_like_LEL 110..207 CDD:239418 24/99 (24%)
tspan4lNP_001415142.1 None

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