DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp74F and tspan1

DIOPT Version :10

Sequence 1:NP_524132.1 Gene:Tsp74F / 39995 FlyBaseID:FBgn0036769 Length:236 Species:Drosophila melanogaster
Sequence 2:NP_001016107.1 Gene:tspan1 / 548861 XenbaseID:XB-GENE-868363 Length:245 Species:Xenopus tropicalis


Alignment Length:69 Identity:17/69 - (24%)
Similarity:26/69 - (37%) Gaps:26/69 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 CPNDKFGGCGSILSL------HLGSEEAQRGKGYKCRGGIMAEEAVSLFKCFYEQGNPN--APKP 157
            |.:.: ||...:.||      ||  :.:..|.|.:.||               ..|.|:  :||.
 Frog   366 CSSSR-GGRPGLSSLPPRGPHHL--DNSSPGPGSEARG---------------INGGPSRMSPKA 412

  Fly   158 HRPV 161
            .||:
 Frog   413 QRPL 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp74FNP_524132.1 Tetraspanin 14..233 CDD:459767 17/69 (25%)
NET-5_like_LEL 110..207 CDD:239418 14/60 (23%)
tspan1NP_001016107.1 Tetraspanin 7..238 CDD:459767
uroplakin_I_like_LEL 107..212 CDD:239409
Blue background indicates that the domain is not in the aligned region.

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