DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp74F and Tspan33

DIOPT Version :10

Sequence 1:NP_524132.1 Gene:Tsp74F / 39995 FlyBaseID:FBgn0036769 Length:236 Species:Drosophila melanogaster
Sequence 2:NP_001102697.1 Gene:Tspan33 / 500065 RGDID:1560915 Length:283 Species:Rattus norvegicus


Alignment Length:246 Identity:62/246 - (25%)
Similarity:120/246 - (48%) Gaps:25/246 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 VKYSLFIANFVIFVGGAIVFCLTLWTLVDRSFVNELLGTNLFSGAVYVLLVTSIIICLVSFLGCV 78
            |||.||..|.:.:|...::..:.::..: .......|.......|: :|:|..:::.|::|.||:
  Rat    22 VKYLLFFFNMLFWVISMVMVAVGVYARL-MKHAEAALACLAVDPAI-LLIVVGVLMFLLTFCGCI 84

  Fly    79 GAGKEVKCLLLTYFIIVALVFVTMLIGGVLGYVFRERVQQTMRQEMRSTMALYGSRREITQAWDL 143
            |:.:|..|||.|:.:.:.:||:..|..|:||:||.::.:..:.:.:.:.:..|....::....|.
  Rat    85 GSLRENICLLQTFSLCLTIVFLLQLAAGILGFVFSDKARGKVSEIINNAIVHYRDDLDLQNLIDF 149

  Fly   144 TQERLQCCGVDTWHDW--NRY------GP------VPESCC-----QELFG---GQRKECTIFPT 186
            .|::..|||..::.||  |.|      .|      ||.|||     |.:..   ||..:...:..
  Rat   150 GQKKFSCCGGISYRDWSQNMYFNCSEDNPSRERCSVPYSCCLPTPNQAVINTMCGQGMQALDYLE 214

  Fly   187 ITN-LYNQGCLYVTTNFIRDHAAVIGGTSIAVAILMIFGMIFSCLLFNMIE 236
            .:. :|..||:....|:|..:..::||.::.:||..:.|::.|.:|.|.|:
  Rat   215 ASKVIYTNGCIDKLVNWIHSNLFLLGGVALGLAIPQLVGILLSQVLVNQIK 265

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp74FNP_524132.1 Tetraspanin 14..233 CDD:459767 60/241 (25%)
NET-5_like_LEL 110..207 CDD:239418 26/119 (22%)
Tspan33NP_001102697.1 Tetraspanin 22..262 CDD:459767 60/241 (25%)
penumbra_like_LEL 116..236 CDD:239411 26/119 (22%)

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