DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp74F and tspan8

DIOPT Version :10

Sequence 1:NP_524132.1 Gene:Tsp74F / 39995 FlyBaseID:FBgn0036769 Length:236 Species:Drosophila melanogaster
Sequence 2:NP_001011430.2 Gene:tspan8 / 496915 XenbaseID:XB-GENE-1016291 Length:230 Species:Xenopus tropicalis


Alignment Length:226 Identity:72/226 - (31%)
Similarity:122/226 - (53%) Gaps:10/226 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 VKYSLFIANFVIFVGGAIVFCLTLWTLVDRSFVNELL--GTNLFSGAVYVLLVTSIIICLVSFLG 76
            :|||:|..||:.::.|.::..:::|..|.:|...||.  |.:|.| ||.:::....||.::.|.|
 Frog     8 LKYSMFAFNFLFWLCGCVILGVSIWVRVSKSVQQELNIDGGSLLS-AVDLMIAVGAIIMVLGFFG 71

  Fly    77 CVGAGKEVKCLLLTYFIIVALVFVTMLIGGVLGYVFRERVQQTMRQEMRSTMALYGSRREITQAW 141
            |.||.:|.:||||.:||.:.|:....:..||||.|::.:::..:.|.....:.|.|.......::
 Frog    72 CCGAIRESRCLLLLFFIGLFLILALQITAGVLGAVYKPKIEAQLNQTFYKLLPLSGQDESFKTSF 136

  Fly   142 DLTQERLQCCG-VDTWHDWNRYGPVPESC-CQELFGGQRKECTIFPTITNLYNQGCLYVTTNFIR 204
            :..|:..|||| |:.:.||.  ..||.|| |...  .:...|..|.. .|.|.:.||.|.::|.:
 Frog   137 ENIQKESQCCGLVNGYTDWG--ANVPASCICPTT--SRTNNCIYFAG-KNYYKETCLGVISDFFK 196

  Fly   205 DHAAVIGGTSIAVAILMIFGMIFSCLLFNMI 235
            :|..:|.|.:..:|.:.|||::||.:|:..|
 Frog   197 NHLVIIIGIAFGLAAVEIFGLVFSMILYCQI 227

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp74FNP_524132.1 Tetraspanin 14..233 CDD:459767 71/222 (32%)
NET-5_like_LEL 110..207 CDD:239418 25/98 (26%)
tspan8NP_001011430.2 Tetraspanin 8..225 CDD:459767 71/222 (32%)
TM4SF3_like_LEL 101..199 CDD:239407 29/102 (28%)

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