DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp74F and tspan36

DIOPT Version :10

Sequence 1:NP_524132.1 Gene:Tsp74F / 39995 FlyBaseID:FBgn0036769 Length:236 Species:Drosophila melanogaster
Sequence 2:NP_001002748.1 Gene:tspan36 / 437021 ZFINID:ZDB-GENE-040718-248 Length:243 Species:Danio rerio


Alignment Length:233 Identity:53/233 - (22%)
Similarity:100/233 - (42%) Gaps:12/233 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 MDCCGQFVKYSLFIANFVIFVGGAIVFCLTLWTLVDRSFVNELLGTNLFSGAVYVLLVTSIIICL 71
            |||.....|..|.:.:.:.:..||.:..:..:.:...:...:.:..........:::..::::.:
Zfish     1 MDCGIITSKTILLLLSLIFWAAGAALAYVGSYVIKSYNNFEDFMSDRHTLIPAAIIIGVAVVMFI 65

  Fly    72 VSFLGCVGAGKEVKCLLLTYFIIVALVFVTMLIGGVLGYVFRERVQQTMRQEMRSTMALYGSRRE 136
            :.|:||....:|.|..|..:.||:.|:|...:...|.|.::|.|::..:.:.|......|.....
Zfish    66 IGFVGCCATLRESKVGLGLFLIIIMLIFAAEVTAFVFGIIYRGRIRGDLEKSMNDVFLKYDGLNS 130

  Fly   137 ITQAWDLTQERLQCCGVDTWHDW-------NRYGPVPESCCQELFGGQRKECTIFPTITNLYN-Q 193
            .|.|.|..|.:|:||||....||       .....||:|||:    ....:||...:..:|.| |
Zfish   131 ETHAVDYLQSQLECCGVKNQTDWTLTSWFAQHNNTVPQSCCK----ANMTQCTGQLSQPDLLNTQ 191

  Fly   194 GCLYVTTNFIRDHAAVIGGTSIAVAILMIFGMIFSCLL 231
            ||.......::|..:......:..||:..|||:..|::
Zfish   192 GCEAKLEQVLQDVLSYAMLVILGFAIIKFFGMLSVCVI 229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp74FNP_524132.1 Tetraspanin 14..233 CDD:459767 50/226 (22%)
NET-5_like_LEL 110..207 CDD:239418 28/104 (27%)
tspan36NP_001002748.1 Tetraspanin 8..231 CDD:459767 50/226 (22%)
TM4SF8_like_LEL 103..206 CDD:239416 29/106 (27%)

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