DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp74F and tspan4a

DIOPT Version :9

Sequence 1:NP_524132.1 Gene:Tsp74F / 39995 FlyBaseID:FBgn0036769 Length:236 Species:Drosophila melanogaster
Sequence 2:XP_009292176.1 Gene:tspan4a / 436620 ZFINID:ZDB-GENE-040718-38 Length:321 Species:Danio rerio


Alignment Length:236 Identity:56/236 - (23%)
Similarity:117/236 - (49%) Gaps:26/236 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 CGQFVKYSLFIANFVIFVGGAIVFCLTLW-TLVDRSFVNELLGTNLFS-GAVYVLLVTSIIICLV 72
            |.:.::|.:...|.:.::.|..:..:.:| ::...:|..  |.::|.| .|..:|:....::.::
Zfish    87 CLRALRYGMVFFNLLFWLCGCGILGVGVWLSITQGNFAT--LSSSLPSLSAANLLIAAGTVVMVI 149

  Fly    73 SFLGCVGAGKEVKCLLLTYFIIVALVFVTMLIGGVLGYVFRERVQQTMRQEMRSTMALYGSRREI 137
            ..||||||.||.:.|||::||::.|:|:..::..:|.:.:::::....:.:::..:.|:|:...|
Zfish   150 GCLGCVGAVKENRPLLLSFFILLLLIFLLEILFIILFFSYQDQIDLYAQNDLKKGLQLFGTEGNI 214

  Fly   138 --TQAWDLTQERLQCCGVDTWHDWNRY---GPVPESCCQELFGGQRKECTIFPTITNLYNQG--- 194
              |.||.:.|...:||||....||.:.   ..||:|||.|           :.....|.|.|   
Zfish   215 GLTNAWSIVQTDFRCCGVTNHTDWFQVYNTSRVPDSCCLE-----------YSDNCGLENPGTWW 268

  Fly   195 ---CLYVTTNFIRDHAAVIGGTSIAVAILMIFGMIFSCLLF 232
               |......:::::...:...::..|:..|.|::||..:|
Zfish   269 TAPCYERVKGWLQENLVALWIFALCTALTQILGLVFSMTIF 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp74FNP_524132.1 Tetraspannin 14..231 CDD:395265 54/229 (24%)
tspan4aXP_009292176.1 Tetraspannin 91..311 CDD:278750 55/232 (24%)
NET-5_like_LEL 189..284 CDD:239418 23/105 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X124
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
44.010

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