DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp74F and Tsp86D

DIOPT Version :9

Sequence 1:NP_524132.1 Gene:Tsp74F / 39995 FlyBaseID:FBgn0036769 Length:236 Species:Drosophila melanogaster
Sequence 2:NP_001262468.1 Gene:Tsp86D / 41310 FlyBaseID:FBgn0037848 Length:316 Species:Drosophila melanogaster


Alignment Length:272 Identity:60/272 - (22%)
Similarity:119/272 - (43%) Gaps:49/272 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 FSSRMDCCGQFVKYSLFIANFVIFVGGAIVFCLTLWTLVDRSFVNELLGTN--LFSGAVY----- 60
            ||....|    |||.:|:.||:.::.|.::..:.::     :|:::|:..|  |....:|     
  Fly    24 FSYVSSC----VKYMIFLLNFLFWLFGGLLLAIGVY-----AFMDKLMDGNGWLRLDTIYDVIFN 79

  Fly    61 ---VLLVTSIIICLVSFLGCVGAGKEVKCLLLTYFIIVALVFVTMLIGGVLGYVFRERVQQTMRQ 122
               |:::..:|:..|||.||:||.:|...||..|.:.:.|.|:..:...::.:||.:.:...:..
  Fly    80 ISLVMIIAGVIVFTVSFAGCLGALRENTWLLKLYSMCLLLFFILEMSLAIICFVFPQYMNSFLEY 144

  Fly   123 EMRSTMA-LYGSRREITQAWDLTQERLQCCGVDT--WHDW--NRY----GP------VPESCCQE 172
            :....:. .|....::....|..|:...|||:..  :.||  |.|    .|      ||.|||..
  Fly   145 QFTDKIIHSYRDDSDLQNFIDFAQQEFNCCGLSNAGYQDWSKNEYFNCSSPSVERCGVPYSCCIN 209

  Fly   173 L-------------FGGQRKECTIFPTITNLYNQGCLYVTTNFIRDHAAVIGGTSIAVAILMIFG 224
            .             :|.|.:  ::......::..||:.:...::..:..||.|.::.:|:|.:|.
  Fly   210 ATDISSGLVNIMCGYGVQVR--SVAAASKRIWTSGCIEIVRVWVERNLYVIAGVALGIALLQLFV 272

  Fly   225 MIFSCLLFNMIE 236
            :..:..|...|:
  Fly   273 IYLAKTLEGQID 284

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp74FNP_524132.1 Tetraspannin 14..231 CDD:395265 55/254 (22%)
Tsp86DNP_001262468.1 Tetraspannin 51..283 CDD:278750 49/238 (21%)
penumbra_like_LEL 132..255 CDD:239411 22/124 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

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