DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp74F and tspan6

DIOPT Version :10

Sequence 1:NP_524132.1 Gene:Tsp74F / 39995 FlyBaseID:FBgn0036769 Length:236 Species:Drosophila melanogaster
Sequence 2:NP_999939.1 Gene:tspan6 / 406802 ZFINID:ZDB-GENE-030131-5435 Length:251 Species:Danio rerio


Alignment Length:247 Identity:61/247 - (24%)
Similarity:108/247 - (43%) Gaps:39/247 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 CCGQF-VKYSLFIANFVIFVGGAIVFCLTLWTLVDRSF---VNELLGTNLFSGAVYVLLVTSIII 69
            |...| :.|||     :.:..|.|:..:.:|..|:..|   ||...|||    |.|||:.|..:|
Zfish    16 CLKTFLISYSL-----IFWFTGVILLAVGVWGKVNLEFDLLVNSEHGTN----APYVLIGTGAVI 71

  Fly    70 CLVSFLGCVGAGKEVKCLLLTYFIIVALVFVTMLIGGVLGYVFRERVQQTMRQEMRSTMALYGSR 134
            .:....||....:....:|..|.:.:.|||:..|:.|:.|::||..::..::...:...:.|..:
Zfish    72 IIFGLFGCFATCRGSPWMLKLYAMFLVLVFLAELVAGISGFIFRHEIKAVLKGAYQKAESNYMGK 136

  Fly   135 REITQAWDLTQERLQCCGVDTWHDW------NRYGPVPESCCQ----------ELFGGQRKECTI 183
            .:  :..|..|..|||||.:.:..|      .:.| :|:|||.          ||...::.:..:
Zfish   137 DD--EDLDRIQRTLQCCGEENYTSWANTTYFEKEG-IPKSCCNVTASVNCTSAELKDLKKADSVV 198

  Fly   184 FPTITNLYNQGCLYVTTNFIRDHAAVIGGTSIAVAILMIFGMIFSCLLFNMI 235
                   |:|||..:.:..:..:..:|.|.|..:|...:.|:..:|.|...|
Zfish   199 -------YHQGCFSLMSTTMEANLGIIAGISFGIAFFQVIGIFLACCLSRYI 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp74FNP_524132.1 Tetraspanin 14..233 CDD:459767 58/237 (24%)
NET-5_like_LEL 110..207 CDD:239418 22/112 (20%)
tspan6NP_999939.1 Tetraspanin 17..241 CDD:459767 59/242 (24%)
TM4SF2_6_like_LEL 112..215 CDD:239414 22/112 (20%)

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