DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tsp74F and cd81

DIOPT Version :10

Sequence 1:NP_524132.1 Gene:Tsp74F / 39995 FlyBaseID:FBgn0036769 Length:236 Species:Drosophila melanogaster
Sequence 2:NP_989271.1 Gene:cd81 / 394885 XenbaseID:XB-GENE-946220 Length:237 Species:Xenopus tropicalis


Alignment Length:242 Identity:66/242 - (27%)
Similarity:112/242 - (46%) Gaps:40/242 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 CGQFVKYSLFIANFVIFVGGAIVFCLTLWTLVDRSFVNELL---------GTNLFSGAVYVLLVT 65
            |.:.:||.||:.||:.::.|.::..:.||...|....|.|.         ||  |...||:::..
 Frog     6 CTKCIKYLLFVFNFIFWLAGGVILGVALWLRHDPQTSNLLFQQFEDKHAPGT--FYIGVYIIIAV 68

  Fly    66 SIIICLVSFLGCVGAGKEVKCLLLTYFIIVALVFVTMLIGGVLGYVFRERVQQTMRQEMRSTM-- 128
            ..::..|.||||.||.:|.:|||.|:|..:.::|...:..|:.|:|.|::|.:.||.......  
 Frog    69 GAVMMFVGFLGCYGAIQESQCLLGTFFACLVILFACEVAAGIWGFVNRDQVSKEMRLFYSEVYQH 133

  Fly   129 ALYGSRREITQAWDLTQ---ERLQCCGVDTWHDWNRYGPVPESCCQELFGGQRKECTIFPTITNL 190
            |..|::.:..:|..:.:   |.|||||..:...:.... :.:.|        .|...|...||  
 Frog   134 ATTGTKEQQQKALPVLKAFHETLQCCGDASLKKYVTMS-ITDMC--------PKRSNILEQIT-- 187

  Fly   191 YNQGC------LYVTTNFIRDHAAVIGGTSIAVAILMIFGMIFSCLL 231
             .:.|      |:.|..::      :|..::.||::||..||||.:|
 Frog   188 -IEDCHQKIDVLFSTKLYL------VGIAAVVVAVIMIIEMIFSMVL 227

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp74FNP_524132.1 Tetraspanin 14..233 CDD:459767 65/238 (27%)
NET-5_like_LEL 110..207 CDD:239418 22/107 (21%)
cd81NP_989271.1 Tetraspanin 10..229 CDD:459767 65/238 (27%)

Return to query results.
Submit another query.