DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp74F and cd81

DIOPT Version :9

Sequence 1:NP_524132.1 Gene:Tsp74F / 39995 FlyBaseID:FBgn0036769 Length:236 Species:Drosophila melanogaster
Sequence 2:NP_989271.1 Gene:cd81 / 394885 XenbaseID:XB-GENE-946220 Length:237 Species:Xenopus tropicalis


Alignment Length:242 Identity:66/242 - (27%)
Similarity:112/242 - (46%) Gaps:40/242 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 CGQFVKYSLFIANFVIFVGGAIVFCLTLWTLVDRSFVNELL---------GTNLFSGAVYVLLVT 65
            |.:.:||.||:.||:.::.|.::..:.||...|....|.|.         ||  |...||:::..
 Frog     6 CTKCIKYLLFVFNFIFWLAGGVILGVALWLRHDPQTSNLLFQQFEDKHAPGT--FYIGVYIIIAV 68

  Fly    66 SIIICLVSFLGCVGAGKEVKCLLLTYFIIVALVFVTMLIGGVLGYVFRERVQQTMRQEMRSTM-- 128
            ..::..|.||||.||.:|.:|||.|:|..:.::|...:..|:.|:|.|::|.:.||.......  
 Frog    69 GAVMMFVGFLGCYGAIQESQCLLGTFFACLVILFACEVAAGIWGFVNRDQVSKEMRLFYSEVYQH 133

  Fly   129 ALYGSRREITQAWDLTQ---ERLQCCGVDTWHDWNRYGPVPESCCQELFGGQRKECTIFPTITNL 190
            |..|::.:..:|..:.:   |.|||||..:...:.... :.:.|        .|...|...||  
 Frog   134 ATTGTKEQQQKALPVLKAFHETLQCCGDASLKKYVTMS-ITDMC--------PKRSNILEQIT-- 187

  Fly   191 YNQGC------LYVTTNFIRDHAAVIGGTSIAVAILMIFGMIFSCLL 231
             .:.|      |:.|..::      :|..::.||::||..||||.:|
 Frog   188 -IEDCHQKIDVLFSTKLYL------VGIAAVVVAVIMIIEMIFSMVL 227

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp74FNP_524132.1 Tetraspannin 14..231 CDD:395265 64/236 (27%)
cd81NP_989271.1 Tetraspannin 10..227 CDD:366035 64/236 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1051357at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.020

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