DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp74F and Tspan5

DIOPT Version :10

Sequence 1:NP_524132.1 Gene:Tsp74F / 39995 FlyBaseID:FBgn0036769 Length:236 Species:Drosophila melanogaster
Sequence 2:NP_001004090.2 Gene:Tspan5 / 362048 RGDID:1303176 Length:268 Species:Rattus norvegicus


Alignment Length:256 Identity:64/256 - (25%)
Similarity:119/256 - (46%) Gaps:35/256 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 MDCCGQFVKYSLFIANFVIFVGGAIVFCLTLWTLVDRSFVNELLGTNLFSG--AVYVLLVTSIII 69
            :.||   :||.:|..|.:.:..|.....:.||...::..::.:.......|  .|::.||...::
  Rat    11 VSCC---IKYFIFGFNVIFWFLGITFLGIGLWAWNEKGVLSNISSITDLGGFDPVWLFLVVGGVM 72

  Fly    70 CLVSFLGCVGAGKEVKCLLLTYFIIVALVFVTMLIGGVLGYVFRERVQQTMRQEMRSTMALYGSR 134
            .::.|.||:||.:|...||..:.:.:.::|...|..|||.:||::.::..:...:.:.:..|...
  Rat    73 FILGFAGCIGALRENTFLLKFFSVFLGIIFFLELTAGVLAFVFKDWIKDQLYFFINNNIRAYRDD 137

  Fly   135 REITQAWDLTQERLQCCGVDTWHDWN---------------RYGPVPESCC-----QELFGGQ-- 177
            .::....|.|||..||||.....|||               |.| ||.|||     :::...|  
  Rat   138 IDLQNLIDFTQEYWQCCGAFGADDWNLNIYFNCTDSNASRERCG-VPFSCCTKDPAEDVINTQCG 201

  Fly   178 ---RKECTIFPTITNLYNQGCLYVTTNFIRDHAAVIGGTSIAVAILMIFGMIFSCLLFNMI 235
               |::..:...|. :|.:||:.....:::|:..::.|..|.:|:|.|||:   ||..|::
  Rat   202 YDARQKPEVDQQIV-IYTKGCVPQFEKWLQDNLTIVAGIFIGIALLQIFGI---CLAQNLV 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp74FNP_524132.1 Tetraspanin 14..233 CDD:459767 61/245 (25%)
NET-5_like_LEL 110..207 CDD:239418 28/121 (23%)
Tspan5NP_001004090.2 Tetraspanin 15..258 CDD:459767 62/247 (25%)
TM4SF9_like_LEL 113..233 CDD:239412 28/121 (23%)

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