DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp74F and Tsp42Ec

DIOPT Version :9

Sequence 1:NP_524132.1 Gene:Tsp74F / 39995 FlyBaseID:FBgn0036769 Length:236 Species:Drosophila melanogaster
Sequence 2:NP_523629.1 Gene:Tsp42Ec / 35612 FlyBaseID:FBgn0033124 Length:232 Species:Drosophila melanogaster


Alignment Length:233 Identity:57/233 - (24%)
Similarity:103/233 - (44%) Gaps:21/233 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 MDCCGQFVKYSLFIANFVIFVGGAIVFCLTLWTLVDRSFVNELLGTNLFSGAVYV-LLVTSIIIC 70
            |.|....|.:.|:|.|.|..:.|.::..|....|.|.|.. ::.|:......:.: :.|...:|.
  Fly     1 MGCLSGIVNFILYIVNIVFLIVGILLIVLGSIMLSDLSRF-DVAGSGTDPNTIPICVTVLGGLIF 64

  Fly    71 LVSFLGCVGAGKEVKCLLLTYFIIVALVFVTMLIGGVLGYVFRERVQQTMRQEMRSTMALYGSRR 135
            :|||.||.|..::..|:...|..:|.::|:..|:  :..:||..|  .....:|.:.:.|.....
  Fly    65 VVSFFGCYGIFRQSVCMTGAYTSMVFVLFILQLV--LTCWVFVNR--SAFLGDMSNLVNLLWDSH 125

  Fly   136 EITQAWDLTQERLQCCGVDTWHDWNRYG-PVPESCCQELFGGQRKECTIFPTITNLYNQ--GCLY 197
            :.| |..:.:|...|||..::.::|..| .||.:||..|   .|:.....|::   |..  ||..
  Fly   126 DYT-AMGVLEETFGCCGDTSYTNYNNIGLSVPGTCCGYL---DRQATCNTPSV---YQSRPGCSA 183

  Fly   198 VTTNFIRDHAAVI--GGTSIAVAILMIF---GMIFSCL 230
            ....|..|:..:|  .|..:.:..|::|   |.:.:|:
  Fly   184 KFEEFWNDNMDIIRWSGLGLCIFDLVVFLIAGALTNCM 221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp74FNP_524132.1 Tetraspannin 14..231 CDD:395265 55/226 (24%)
Tsp42EcNP_523629.1 Tetraspannin 7..221 CDD:278750 54/225 (24%)
tetraspanin_LEL 104..193 CDD:239401 24/97 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

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