DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tsp74F and Tsp26A

DIOPT Version :9

Sequence 1:NP_524132.1 Gene:Tsp74F / 39995 FlyBaseID:FBgn0036769 Length:236 Species:Drosophila melanogaster
Sequence 2:NP_001097093.1 Gene:Tsp26A / 33838 FlyBaseID:FBgn0031760 Length:314 Species:Drosophila melanogaster


Alignment Length:263 Identity:63/263 - (23%)
Similarity:126/263 - (47%) Gaps:46/263 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SSRMDCCGQFVKYSLFIANFVIFVGGAIVFCLTLWTLVDRSFVNELLGTNLFS-GAVYVLLVTSI 67
            :|.:.||   :||.||.:|.::::...:|..:.:|...::.....:...:..: ...:||::...
  Fly    12 TSEISCC---LKYLLFASNVILWLSALLVLSVGIWAWSEKGMFRNIARLHFIALDPAFVLIILGG 73

  Fly    68 IICLVSFLGCVGAGKEVKCLLLTYFIIVALVFVTMLIGGVLGYVFRER--VQQTMRQEMRSTMAL 130
            :..|:.|:|.|||.:|..|||..|.|.::::.:..:....:.:|.:::  ::....:.:::.:..
  Fly    74 VTFLLGFMGSVGALRENTCLLGAYAIFLSVLLIAEIGFCAVAFVLKDKGWIKDQATEGLKAFIRH 138

  Fly   131 YGSRREITQA----WDLTQERLQCCGVDTWHDW--NRY--------GP-----VPESCC----QE 172
            |  |.:..|.    | :.::.|||||:|...||  |.|        |.     ||.|||    ||
  Fly   139 Y--REDADQQNLIDW-IQEDWLQCCGIDGPKDWDSNNYFNCSSIAIGSREACGVPFSCCRRRPQE 200

  Fly   173 LFGGQRKECTI------FPTITNLYNQGCLYVTTNFIRDH--AAVIGGTSIAVAILMIFGMIFSC 229
            :.  :.|:|..      :|...|::.:|||....:::..|  :..||    .||:|::.||..|.
  Fly   201 VI--KNKQCGYDVRKEGYPVDRNIHERGCLRAGEDWLEAHLISVAIG----CVALLVLQGMELSK 259

  Fly   230 LLF 232
            :::
  Fly   260 IIY 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp74FNP_524132.1 Tetraspannin 14..231 CDD:395265 60/250 (24%)
Tsp26ANP_001097093.1 Tetraspannin 18..253 CDD:278750 58/246 (24%)
DUF2207 <65..157 CDD:303056 19/94 (20%)
TM4SF9_like_LEL 118..239 CDD:239412 29/125 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

Return to query results.
Submit another query.