DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp74F and cd82b

DIOPT Version :9

Sequence 1:NP_524132.1 Gene:Tsp74F / 39995 FlyBaseID:FBgn0036769 Length:236 Species:Drosophila melanogaster
Sequence 2:NP_997828.1 Gene:cd82b / 324137 ZFINID:ZDB-GENE-030131-2857 Length:256 Species:Danio rerio


Alignment Length:243 Identity:70/243 - (28%)
Similarity:113/243 - (46%) Gaps:17/243 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 CGQFVKYSLFIANFVIFVGGAIVFCLTLWTLVD-RSFVNEL--LGTNLFSGAVYVLLVTSIIICL 71
            |....||.||:.|.:.|:.||::....||..:| :||:..|  ..|:|..|| |:|:....:..|
Zfish     5 CIAATKYFLFLFNLLFFILGAVIMGFGLWVRLDSQSFLTVLQESSTSLKVGA-YILIGIGSLSML 68

  Fly    72 VSFLGCVGAGKEVKCLLLTYFIIVALVFVTMLIGGVLGYVFRERVQQTMRQEMRSTMALY-GSRR 135
            :.||||:||..|::|||..||..:.|:.:..:...||.|..|:.::......:...:..| ||..
Zfish    69 MGFLGCIGAIYEIRCLLGLYFTCLLLILIAQVTAAVLIYFQRDLLKGETYNIVNKILVNYTGSNN 133

  Fly   136 EITQAWDLTQERLQCCGVDTWHDWNRYGPV--------PESCCQELFGGQRKE----CTIFPTIT 188
            ....|||..|..::|||.....||.....:        |.||..|...|..|:    |.......
Zfish   134 TSEDAWDYIQRTMKCCGWSGQSDWKENVMIKNNSKILYPCSCRNESISGSDKQEKGFCEGLSPQW 198

  Fly   189 NLYNQGCLYVTTNFIRDHAAVIGGTSIAVAILMIFGMIFSCLLFNMIE 236
            .::.:||:....::|..:..||.|..:.:|::.:.|||.|..|...::
Zfish   199 PVFTKGCISSLEDWILRNCGVILGVCVGIAVIELLGMILSMCLCKSVQ 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp74FNP_524132.1 Tetraspannin 14..231 CDD:395265 68/232 (29%)
cd82bNP_997828.1 Tetraspannin 24..245 CDD:278750 63/221 (29%)
CD37_CD82_like_LEL 106..218 CDD:239413 24/111 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.910

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