DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp74F and Tspan12

DIOPT Version :10

Sequence 1:NP_524132.1 Gene:Tsp74F / 39995 FlyBaseID:FBgn0036769 Length:236 Species:Drosophila melanogaster
Sequence 2:NP_766595.1 Gene:Tspan12 / 269831 MGIID:1889818 Length:305 Species:Mus musculus


Alignment Length:235 Identity:60/235 - (25%)
Similarity:98/235 - (41%) Gaps:25/235 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 LFIANFVIFVGGAIVFCLTLW---------TLVDRSFVNELLGTNLFSGAVYVLLVTSIIICLVS 73
            |:..|.:.::....|..::.|         ||...:.|.|.:....|.....|::.....:.:|.
Mouse    14 LYALNLLFWLMSISVLAVSAWMRDYLNNVLTLTAETRVEEAVILTYFPVVHPVMIAVCCFLIIVG 78

  Fly    74 FLGCVGAGKEVKCLLLTYFIIVALVFVTMLIGGVLGYVFRER-----VQQTMRQEMRSTMALYG- 132
            .||..|..|....||..||..:.::|...|..||..|   |:     ||.:....:::.|..|| 
Mouse    79 MLGYCGTVKRNLLLLAWYFGTLLVIFCVELACGVWTY---EQEVMVPVQWSDMVTLKARMTNYGL 140

  Fly   133 -SRREITQAWDLTQERLQCCGVDTWHDWNRYGPV---PESCCQELFGGQRKECTIFPTITNLYNQ 193
             ..|.:|.||:..|...:||||..:.||.....:   |:|||...|.|..|:.. ...:::||.:
Mouse   141 PRYRWLTHAWNYFQREFKCCGVVYFTDWLEMTEMDWPPDSCCVREFPGCSKQAH-QEDLSDLYQE 204

  Fly   194 GCLYVTTNFIR--DHAAVIGGTSIAVAILMIFGMIFSCLL 231
            ||.....:|:|  ....|:....|::.:..|..||.:..|
Mouse   205 GCGKKMYSFLRGTKQLQVLRFLGISIGVTQILAMILTITL 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp74FNP_524132.1 Tetraspanin 14..233 CDD:459767 60/235 (26%)
NET-5_like_LEL 110..207 CDD:239418 31/108 (29%)
Tspan12NP_766595.1 Tetraspanin 10..246 CDD:459767 60/235 (26%)
TM4SF12_like_LEL 116..218 CDD:239410 30/102 (29%)

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