DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp74F and tsp-21

DIOPT Version :9

Sequence 1:NP_524132.1 Gene:Tsp74F / 39995 FlyBaseID:FBgn0036769 Length:236 Species:Drosophila melanogaster
Sequence 2:NP_001370185.1 Gene:tsp-21 / 259720 WormBaseID:WBGene00023491 Length:301 Species:Caenorhabditis elegans


Alignment Length:237 Identity:54/237 - (22%)
Similarity:107/237 - (45%) Gaps:21/237 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 FIANFVIFVGGAIVFCLTLWTLVDRSFVNELLGTNLFS-GAVYVLLVTSIIICLVSFLGCVGAGK 82
            |:||....:.|.....:.:|....::...||..|:..: .|..:.:.|.:.|.::..:|.:|...
 Worm    18 FLANVCFLISGLSSLIVGVWLYSSKNNFIELTPTSYSALSAAGLCVFTGVTIFIIVAVGYLGVSW 82

  Fly    83 EVKCLLLTYFIIVALVFVTMLIGGVLGYVFRERVQQTMRQEM------RSTMALYGSRREITQAW 141
            ..|.||.:|...|.|:.:...|..:.|.:.:|..::.:|:.|      .:.:...|...:::..|
 Worm    83 SNKSLLYSYIGFVILLILVHGIARITGSLHKEEAKENLRKSMLHNINTTAVVTKIGREIKLSLTW 147

  Fly   142 DLTQERLQCCGVDTWHDW--------NRYGPVPESCCQ-ELFGGQR--KECTIFPTITN-LYNQG 194
            |..|..|||||||.:.||        |.|  .|:|||. :.|..:.  :.|...|...: ||.:|
 Worm   148 DHLQRELQCCGVDNYTDWHYSVHWPNNLY--TPDSCCDPQHFDAENGTENCGKLPDEQSLLYQKG 210

  Fly   195 CLYVTTNFIRDHAAVIGGTSIAVAILMIFGMIFSCLLFNMIE 236
            |....::::..|..::...:..:.::.|..:|.|.::..:::
 Worm   211 CFPKFSDWLYHHIILVNWVTSILFVVEILLLILSLVVLRVLK 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp74FNP_524132.1 Tetraspannin 14..231 CDD:395265 54/230 (23%)
tsp-21NP_001370185.1 CD151_like_LEL 106..223 CDD:239408 30/118 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48589
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X124
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.920

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