DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp74F and Cd9

DIOPT Version :10

Sequence 1:NP_524132.1 Gene:Tsp74F / 39995 FlyBaseID:FBgn0036769 Length:236 Species:Drosophila melanogaster
Sequence 2:XP_063141640.1 Gene:Cd9 / 24936 RGDID:2318 Length:249 Species:Rattus norvegicus


Alignment Length:236 Identity:60/236 - (25%)
Similarity:104/236 - (44%) Gaps:46/236 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 VKYSLFIANFVIFVGGAIVFCLTLWTLVDRS----FVNELLGTNLFSGAVYVLLVTSIIICLVSF 74
            :||.||..||:.::.|..|..:.||...|..    |..|...::.::| ||:|:....::.||.|
  Rat    10 IKYLLFGFNFIFWLAGIAVLAIGLWLRFDSQTKSIFEQETNHSSFYTG-VYILIGAGALMMLVGF 73

  Fly    75 LGCVGAGKEVKCLLLTYFIIVALVFVTMLIGGVLGYVFRERVQQTMRQEMRSTMALYGSR----R 135
            |||.||.:|.:|:|..:|..:.::|...:...|.||..::.|.:.:::..:.|.....::    |
  Rat    74 LGCCGAVQESQCMLGLFFGFLLVIFAIEIAAAVWGYTHKDEVIKELQEFYKDTYQKLRNKDEPQR 138

  Fly   136 EITQAWDLTQERLQCCGVDTWHDWNRYGPVPE---SCC---QELFGGQRKECTIFPTITNLYNQG 194
            |..:|..:.   |.|||:        .|.|.:   ..|   |.|...|.|.|.  ..|..:::. 
  Rat   139 ETLKAIHMA---LNCCGI--------AGGVEQFISDICPKKQVLESFQVKSCP--DAIDEVFHS- 189

  Fly   195 CLYVTTNFIRDHAAVIGGTSIAVAILMIFG------MIFSC 229
                     :.|  :||...|.:|::|:.|      .:.||
  Rat   190 ---------KFH--IIGAVGIGIAVVMVSGRWSRGKTLVSC 219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp74FNP_524132.1 Tetraspanin 14..233 CDD:459767 60/236 (25%)
NET-5_like_LEL 110..207 CDD:239418 19/106 (18%)
Cd9XP_063141640.1 None

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