DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tsp74F and tsp-17

DIOPT Version :10

Sequence 1:NP_524132.1 Gene:Tsp74F / 39995 FlyBaseID:FBgn0036769 Length:236 Species:Drosophila melanogaster
Sequence 2:NP_001129920.2 Gene:tsp-17 / 192067 WormBaseID:WBGene00006643 Length:312 Species:Caenorhabditis elegans


Alignment Length:305 Identity:58/305 - (19%)
Similarity:102/305 - (33%) Gaps:98/305 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 VKYSLFIANFVIFVGGAIVFCLTLWTLVD--RSFVNELL----GTNLFSGAVYVLLVTSIIICLV 72
            |..|:|...:.:...|.:.  |.||.|:|  |:::.:|:    ...|...:.||.||......||
 Worm    13 VAVSIFSIYYWLSALGHVF--LGLWMLLDPKRNYILDLVHFSENDPLLKASAYVSLVCGCAQLLV 75

  Fly    73 SFLGCVGAGKEVKCLLLTYFIIVALVFVTMLIGGVLGYVFRER---------------------- 115
            .|||..||....:.|||.:.:.:...|:..:..|.|...::::                      
 Worm    76 GFLGLCGAVNRSRFLLLAFVMFLIGTFLADVAMGTLSLFYKDKFSNNYMGVYLKNLTYNRYSRDR 140

  Fly   116 ---------------VQQTMRQEMRSTMALYGSRRE---ITQAWDLTQERLQCCGVDTWHDWNRY 162
                           |::.:|:.::|...:..|..|   :|:..|..|...:|||        ..
 Worm   141 WVLPLMDTIQFYVYSVKENVREIVKSKYGVMTSEPENKMVTEFIDKLQFYEKCCG--------SL 197

  Fly   163 GPV-----------------------PESCCQELFGGQRKECTIFPTITNLYNQ----------- 193
            ||.                       |.|||.::.|     .:....:...|.:           
 Worm   198 GPTDYISSRWSQSTNQDSEEIESPLFPVSCCTQITG-----ASALNPLAKSYARCQQIGANRQWR 257

  Fly   194 ---GCLYVTTNFIRDHAAVIGGTSIAVAILMIFGMIFSCLLFNMI 235
               ||.....::..:...:..|.....|:.|:.|:..||.|.:.|
 Worm   258 HAVGCSERLMSWFNEQIWIFVGFGFGSALTMMLGICLSCCLISKI 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp74FNP_524132.1 Tetraspanin 14..233 CDD:459767 57/301 (19%)
NET-5_like_LEL 110..207 CDD:239418 21/173 (12%)
tsp-17NP_001129920.2 Tetraspanin 11..>150 CDD:459767 29/138 (21%)
CD37_CD82_like_LEL 153..275 CDD:239413 21/134 (16%)

Return to query results.
Submit another query.