DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp74F and tsp-15

DIOPT Version :10

Sequence 1:NP_524132.1 Gene:Tsp74F / 39995 FlyBaseID:FBgn0036769 Length:236 Species:Drosophila melanogaster
Sequence 2:NP_492404.1 Gene:tsp-15 / 192065 WormBaseID:WBGene00006641 Length:258 Species:Caenorhabditis elegans


Alignment Length:249 Identity:60/249 - (24%)
Similarity:108/249 - (43%) Gaps:29/249 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 GQFVKYSLFIANFVIFVGGAIVFCLTLWTLVDRSFVNELLGTNLFSGAVYVLLVTSIIICLVSFL 75
            |:.:|:|..:...:..:......|..:|.|..||...||:..:|:.....:|::.| |:.::::|
 Worm    13 GRLIKFSYIVTALISILFSISCICYGIWLLARRSQYAELVSPSLYVDVGRILVIIS-ILSILNYL 76

  Fly    76 GCVGA-GKEVKCLLLTYFIIVALVFVTMLIGGVLGYVFRERVQQTMRQEMR---STMALYGSR-- 134
            .|..| .||::|.:.:..:...::.|.::|||.:|..||:::.......::   |...|||:.  
 Worm    77 ICFYAIFKEMRCFVTSCAVASIVIAVMLIIGGCIGLNFRDQLTHYTPLNLKMLTSLRELYGTHDM 141

  Fly   135 REITQAWDLTQERLQCCGVD-----------TWHDWNRYGP---VPESCCQELFGGQRKECTIFP 185
            :.||::||..|...:||||:           .|:...| .|   :|||||   ...:.:.|...|
 Worm   142 KGITESWDALQSNFKCCGVNGTDNAQIWKTSKWYMHQR-APKLLIPESCC---IPSEIERCRSNP 202

  Fly   186 TITN----LYNQGCLYVTTNFIRDHAAVIGGTSIAVAILMIFGMIFSCLLFNMI 235
            ...:    .|...|.....|.:.....|.....|..||:.|...:..|....:|
 Worm   203 FDQDAPPPYYTSTCYEPLQNDLLHVMNVASWLCITNAIVQIIPSVAGCWYSKLI 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp74FNP_524132.1 Tetraspanin 14..233 CDD:459767 58/242 (24%)
NET-5_like_LEL 110..207 CDD:239418 28/119 (24%)
tsp-15NP_492404.1 Tetraspanin 16..>159 CDD:459767 36/143 (25%)
uroplakin_I_like_LEL 110..228 CDD:239409 29/121 (24%)

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