DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp74F and tsp-5

DIOPT Version :10

Sequence 1:NP_524132.1 Gene:Tsp74F / 39995 FlyBaseID:FBgn0036769 Length:236 Species:Drosophila melanogaster
Sequence 2:NP_502621.3 Gene:tsp-5 / 192061 WormBaseID:WBGene00006631 Length:241 Species:Caenorhabditis elegans


Alignment Length:242 Identity:57/242 - (23%)
Similarity:97/242 - (40%) Gaps:33/242 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 CGQFVKYSLFIANFVIFVGGAIVFCLTLW--------TLVDRSFVNELLGTNLFSGAVYVLLVTS 66
            ||:...:..||.|..:.|.|.|:...::|        |:...|.||.|...|:  ...||....|
 Worm     6 CGKLANFLFFILNLGLIVVGVIITWYSIWMVLHQFEVTVARTSLVNLLSVDNI--ECFYVYRTIS 68

  Fly    67 III--CLV--SFLGCVGAGKEVKCLLLTYFIIVALVFVTMLIGGVLGYVFRERVQQ----TMRQE 123
            |:|  |:|  .|.||...|...|..|..:.::|.:|||..::..|:.....:.:::    ..|.|
 Worm    69 IMIGGCMVVLGFCGCFAVGFGSKTALSVHLVLVFIVFVVKIVAIVMFLANNDHLRREFVGVYRDE 133

  Fly   124 MRSTMALYGSRREITQAWDLTQERLQCCGVDTWHDWNRYGPVPESCCQELFGGQRKECTIFPTIT 188
            :   :|.|.:........|.....|:|||.:...|:...|..|.||          ||.....:.
 Worm   134 L---VANYHNNSRTKNTLDWVHTSLKCCGANGCEDFLPAGNFPTSC----------ECGTKNAVV 185

  Fly   189 NLYNQGCLYVTTNFIRDHAAVIGGTSIAVAILMIFGMIFSCLLFNMI 235
            .:  :||..:|.....|....:....:...::.:..|||:.::.:.|
 Worm   186 RM--EGCALITWAVFEDGTLQVAFLGLICMLIELGLMIFAAIVIDRI 230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp74FNP_524132.1 Tetraspanin 14..233 CDD:459767 54/234 (23%)
NET-5_like_LEL 110..207 CDD:239418 20/100 (20%)
tsp-5NP_502621.3 Tetraspanin 11..167 CDD:459767 41/160 (26%)
tetraspanin_LEL 116..191 CDD:239401 17/89 (19%)

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