DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp74F and tsp-4

DIOPT Version :9

Sequence 1:NP_524132.1 Gene:Tsp74F / 39995 FlyBaseID:FBgn0036769 Length:236 Species:Drosophila melanogaster
Sequence 2:NP_502396.2 Gene:tsp-4 / 192060 WormBaseID:WBGene00006630 Length:241 Species:Caenorhabditis elegans


Alignment Length:244 Identity:55/244 - (22%)
Similarity:97/244 - (39%) Gaps:37/244 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 CGQFVKYSLFIANFVIFVGGAIVFCLTLW--------TLVDRSFVNELLGTNL--FSGAVYVLLV 64
            ||:...:..||.|..:.|.|.::...::|        |:...|.|:.|...|:  |    ||...
 Worm     6 CGKLANFLFFILNLGLIVVGVMITWYSIWMILHQFEVTVARTSLVSFLSVDNIEWF----YVYRT 66

  Fly    65 TSIII--CLV--SFLGCVGAGKEVKCLLLTYFIIVALVFVTMLIGGVLGYVFRERVQQ----TMR 121
            .||:|  |:|  ...||.......|..|..:.::|.||||..::..|:....::.:::    ..|
 Worm    67 ISIMIGGCMVVLGLCGCFAVCFGSKTALSVHLVLVFLVFVVKIVAIVMFLANKDHLRREFVGVYR 131

  Fly   122 QEMRSTMALYGSRREITQAWDLTQERLQCCGVDTWHDWNRYGPVPESCCQELFGGQRKECTIFPT 186
            .|:   :|.|.:........|.....|:|||.:...|:...|..|.||          ||.....
 Worm   132 DEL---VANYHNNSRTKNTLDWVHTSLKCCGANGCEDFLPAGNFPTSC----------ECGTKNA 183

  Fly   187 ITNLYNQGCLYVTTNFIRDHAAVIGGTSIAVAILMIFGMIFSCLLFNMI 235
            :..:  :||..:|.....|....:....:...::.:..|||:.::.:.|
 Worm   184 MVRM--EGCALITWAVFEDGTLQVAFLGLICMLIELGLMIFAAIVIDRI 230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp74FNP_524132.1 Tetraspannin 14..231 CDD:395265 52/234 (22%)
tsp-4NP_502396.2 Tetraspannin 11..223 CDD:278750 51/230 (22%)
tetraspanin_LEL 116..191 CDD:239401 17/89 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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