DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp74F and Prph2

DIOPT Version :10

Sequence 1:NP_524132.1 Gene:Tsp74F / 39995 FlyBaseID:FBgn0036769 Length:236 Species:Drosophila melanogaster
Sequence 2:NP_032964.1 Gene:Prph2 / 19133 MGIID:102791 Length:346 Species:Mus musculus


Alignment Length:266 Identity:44/266 - (16%)
Similarity:96/266 - (36%) Gaps:70/266 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 LFIANFVIFVGGAIVFCLTLWTLVDRSFVNELLGTNLFSGAVYVLLVTSIIICLVSFLGCVGAGK 82
            |::.|::..:.|.::|.|.|:..::....:|::..:........|:...::.|:.:.|    |||
Mouse    20 LWLMNWLSVLAGIVLFSLGLFLKIELRKRSEVMNNSESHFVPNSLIGVGVLSCVFNSL----AGK 80

  Fly    83 ------------EVKCLLLTYFIIVALVFVTMLIGGVLGYVFRERVQQTMRQEMRSTMALY---- 131
                        :.|..|..|..:.....|.:.:..:..::.|..::.|:...:::.|..|    
Mouse    81 ICYDALDPAKYAKWKPWLKPYLAVCIFFNVILFLVALCCFLLRGSLESTLAYGLKNGMKYYRDTD 145

  Fly   132 -GSRREITQAWDLTQERLQCCGVDTWHDW-------NRY----------------------GPVP 166
             ..|..:.:..|:.|...:|||.:.:.||       |||                      ..||
Mouse   146 TPGRCFMKKTIDMLQIEFKCCGNNGFRDWFEIQWISNRYLDFSSKEVKDRIKSNVDGRYLVDGVP 210

  Fly   167 ESCCQELFGGQRKECTIFPTIT--------------NLYNQGCLYVTTNFIRDHAAVIGGTSIAV 217
            .|||..   ...:.|..:....              ||:.:||.....|:   :::::....:..
Mouse   211 FSCCNP---SSPRPCIQYQLTNNSAHYSYDHQTEELNLWLRGCRAALLNY---YSSLMNSMGVVT 269

  Fly   218 AILMIF 223
            .::.:|
Mouse   270 LLVWLF 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp74FNP_524132.1 Tetraspanin 14..233 CDD:459767 44/266 (17%)
NET-5_like_LEL 110..207 CDD:239418 26/144 (18%)
Prph2NP_032964.1 Tetraspanin 16..181 CDD:459767 29/164 (18%)
peripherin_like_LEL 120..262 CDD:239415 26/147 (18%)
Interaction with MREG. /evidence=ECO:0000269|PubMed:17260955 341..346
Blue background indicates that the domain is not in the aligned region.

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