DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp74F and tsp-8

DIOPT Version :9

Sequence 1:NP_524132.1 Gene:Tsp74F / 39995 FlyBaseID:FBgn0036769 Length:236 Species:Drosophila melanogaster
Sequence 2:NP_510445.1 Gene:tsp-8 / 181567 WormBaseID:WBGene00006634 Length:282 Species:Caenorhabditis elegans


Alignment Length:274 Identity:69/274 - (25%)
Similarity:105/274 - (38%) Gaps:50/274 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 MDCCGQFVKYSLFIANFVIFVGGAIVFCLTLWTLVDRS----FVNELLGTNLFSGAVYVLLVTSI 67
            |..|...::...|:.||..::.|.:||.|.:|.|.|.:    |.........|....:.|:....
 Worm     1 MGSCVNALRIVTFLFNFAFWLSGVVVFGLGIWLLFDPAASDFFALHSTHPGAFRYVGWFLVGAGA 65

  Fly    68 IICLVSFLGCVGAGKEVKCLLLTYFIIVALVFVTMLIGGVLGYVFRERVQQTMRQEMRSTMA-LY 131
            ||.||.:.||:||.|..:|.|..:..|:.|.|...|...|..:..:|.::..:...|..|:. .|
 Worm    66 IIILVGYFGCIGAWKMNQCALAFFCCILILAFFLELAAAVTLFHKQEHIKHYVESSMYDTIRNRY 130

  Fly   132 GSRREITQAWDLTQERLQCCGVDTWHDW--------------------------------NR--- 161
            .|......|:|..||:.:||||.|:.||                                |:   
 Worm   131 SSETAFKDAFDTVQEKFECCGVKTYTDWLSARWDAEPSTQLEVNEEDAGRIEHGIGAFGGNKGTG 195

  Fly   162 YGPVPESCCQELFG--GQRKEC--TIFPTITNLYNQ-----GCLYVTTNFIRDHAAVIGGTSIAV 217
            ||.||.|||.| .|  .....|  :......|.|.|     ||.......:....::|.|..:.:
 Worm   196 YGRVPSSCCNE-HGKLSYPNNCGRSFSQAPLNTYAQFINTRGCADAVYESVSSSLSLIVGVCVVL 259

  Fly   218 AILMIFGMIFSCLL 231
            .|:.:.|::.|..|
 Worm   260 CIVQLLGIVLSMTL 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp74FNP_524132.1 Tetraspannin 14..231 CDD:395265 66/265 (25%)
tsp-8NP_510445.1 Tetraspannin 8..276 CDD:278750 67/267 (25%)
Heme_Cu_Oxidase_I 13..>108 CDD:294196 29/94 (31%)
tetraspanin_LEL 108..243 CDD:239401 32/135 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1051357at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X124
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

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