DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp74F and tsp-20

DIOPT Version :10

Sequence 1:NP_524132.1 Gene:Tsp74F / 39995 FlyBaseID:FBgn0036769 Length:236 Species:Drosophila melanogaster
Sequence 2:NP_510014.1 Gene:tsp-20 / 181376 WormBaseID:WBGene00006646 Length:279 Species:Caenorhabditis elegans


Alignment Length:252 Identity:63/252 - (25%)
Similarity:114/252 - (45%) Gaps:49/252 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 CCGQFVKYSLFIANFVIFVGGAIVF-CLTLWTLVDRSFVNELLGTNLFSGAVYVLLVTSIIICLV 72
            |.|...|..|||:..::.||  |:| .|.:|..:.|..:..|:.::.:...:|:.:...:...::
 Worm    20 CSGCCSKCQLFISYLLVIVG--ILFLALAIWLYIFRGDLIPLIQSHFYVKCIYLAVGCGVFNVII 82

  Fly    73 SFLGCVGAGKEVKCLLLTYFIIVALVFVTMLIGGVLGYVFRERVQQTMRQEMRSTMA-----LYG 132
            .||  |.:....:|.|:.|.::  |:| :|::.|.|.| |......|..||:.:::.     .|.
 Worm    83 GFL--VHSAVSNRCALVFYLLM--LIF-SMIMEGCLIY-FTFSYHATYEQELNASLPNDILNNYN 141

  Fly   133 SRREITQAWDLTQERLQCCGVDTWHDW------NRYGP-----------VPESCCQELFGGQRKE 180
            ....|.:|.:..|...:|||.:.::||      :.|.|           :|:|||:...  |||.
 Worm   142 LDPNIAKAVNYLQRDSKCCGSNAFNDWPKPEVEDHYLPYAKTVVQRVQYIPDSCCKSTH--QRKG 204

  Fly   181 CTIFPTITNLYNQGCL-------YVTTNFIRDHAAVIGGTSIAVAILMIF-GMIFSC 229
            |.:..:..|::.:|||       |...||:        .|..|.::::.| .:||.|
 Worm   205 CALSDSPNNIFYRGCLPFLKEEVYNNLNFL--------FTVTAASLVLHFANLIFGC 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp74FNP_524132.1 Tetraspanin 14..233 CDD:459767 61/247 (25%)
NET-5_like_LEL 110..207 CDD:239418 31/125 (25%)
tsp-20NP_510014.1 Tetraspanin 25..257 CDD:459767 61/247 (25%)
CD151_like_LEL 118..231 CDD:239408 27/114 (24%)

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