DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp74F and tsp-9

DIOPT Version :9

Sequence 1:NP_524132.1 Gene:Tsp74F / 39995 FlyBaseID:FBgn0036769 Length:236 Species:Drosophila melanogaster
Sequence 2:NP_508232.1 Gene:tsp-9 / 180472 WormBaseID:WBGene00006635 Length:233 Species:Caenorhabditis elegans


Alignment Length:253 Identity:62/253 - (24%)
Similarity:101/253 - (39%) Gaps:62/253 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 MDCCGQFVKYSLFIANFVIFVGGAIVFCLTLWTLVDRSF------------------VNELLGTN 53
            |.|....:|...|:.||.|.:.||::...:||..:|::|                  |||:..  
 Worm     1 MVCGNSCIKLLFFVINFFICIFGALICGFSLWANLDKNFGSHLSDFVRQIEGIDQKLVNEIAE-- 63

  Fly    54 LFSGAVYVLLVTSIIICLVSFLGCVGAGKEVKCLLLTYFIIVALVFVTMLIGGVLGYVFRERVQQ 118
             :..::::|:....::.||.|.||.|||.|...||..:..|:.::....|...|.....||....
 Worm    64 -YQASLWILVAVGALLFLVGFFGCCGAGCESPVLLGLFIFIIVILTAVELGATVFAMTNREEFVS 127

  Fly   119 TMRQEMRSTMALYGSRREITQAWDLTQERLQCCGVDTWHDWNRY------GPVPESCCQELFGGQ 177
            :::|.::.:.|.|..|:.|..    .|...||||. |....|||      ||.|.|.        
 Worm   128 SIQQVLKKSSATYELRKNIKP----IQNVFQCCGA-TAQTQNRYIQDGLCGPEPLSA-------- 179

  Fly   178 RKECTIFPTITNLYNQGCLYVTTNFIRDHAAVIGGTSIAVAILM----IFGMIFSCLL 231
              ....|..|:::....                |.:.:.||.|:    :|.::|||:|
 Worm   180 --PVNCFDRISHMVQSW----------------GESIVVVAFLLLAIELFAILFSCIL 219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp74FNP_524132.1 Tetraspannin 14..231 CDD:395265 59/244 (24%)
tsp-9NP_508232.1 Tetraspannin 7..222 CDD:278750 60/247 (24%)
tetraspanin_LEL 116..>167 CDD:243179 16/55 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48589
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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