DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp74F and tsp-12

DIOPT Version :10

Sequence 1:NP_524132.1 Gene:Tsp74F / 39995 FlyBaseID:FBgn0036769 Length:236 Species:Drosophila melanogaster
Sequence 2:NP_501853.1 Gene:tsp-12 / 177890 WormBaseID:WBGene00006638 Length:308 Species:Caenorhabditis elegans


Alignment Length:269 Identity:62/269 - (23%)
Similarity:114/269 - (42%) Gaps:49/269 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 GFSSRMDCCGQFVKYSLFIANFVIFVGGAIVFCLTLWTLVDR-SFVNEL-LGTNLFSGAVYVLLV 64
            |..|.:.||   ||||:|..|.:.|:.|..:....:|..::: :|||.| ..:.|:....:.||:
 Worm    29 GGESEISCC---VKYSVFSFNVIFFLLGFGLLLFGVWAQIEKNTFVNMLSKASKLYLDPTWPLLI 90

  Fly    65 TSIIICLVSFLGCVGAGKEVKCLLLTYFIIVALVFVTMLIGGVLGYVFRERVQQTMRQEMRSTMA 129
            ...:..::.|.||||:.:|....|..|..::.|:.:.....||..|..|:::...:|..:...:.
 Worm    91 VGFLTFIIGFSGCVGSLRENTSFLTFYSTLLGLLLIAEFSAGVFAYACRDQLDNYIRNLLNDVVV 155

  Fly   130 LYGSRREITQAWDLTQERLQCCGVDTWHDWNR---------------YGPVPESCC--------Q 171
            .|....::....|..||...|||::...||:|               .|.||.|||        :
 Worm   156 GYRDDPDLQLLIDSMQETWMCCGINGADDWDRNTYFSIEAREVASPEAGGVPFSCCINSSKLEFK 220

  Fly   172 ELFGG-----------------QRKECTIFPTITNLYNQGCLYVTTNFIRDHAAVIGGTSIAVAI 219
            ..|.|                 ||    :.....::|.:|||.....::.::..::..:.:.:||
 Worm   221 NYFCGHGVRLKPESHMAAHLAAQR----VMAHTASIYTEGCLPKLQLWLNNNMLLVAVSMVIIAI 281

  Fly   220 LMIFGMIFS 228
            :.:.|:.|:
 Worm   282 IQVLGICFA 290

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp74FNP_524132.1 Tetraspanin 14..233 CDD:459767 58/257 (23%)
NET-5_like_LEL 110..207 CDD:239418 27/136 (20%)
tsp-12NP_501853.1 Tetraspanin 38..293 CDD:459767 58/257 (23%)
tetraspanin_LEL 133..268 CDD:351888 28/138 (20%)

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