DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp74F and Tspan8

DIOPT Version :10

Sequence 1:NP_524132.1 Gene:Tsp74F / 39995 FlyBaseID:FBgn0036769 Length:236 Species:Drosophila melanogaster
Sequence 2:NP_598210.1 Gene:Tspan8 / 171048 RGDID:621783 Length:235 Species:Rattus norvegicus


Alignment Length:238 Identity:65/238 - (27%)
Similarity:116/238 - (48%) Gaps:29/238 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 VKYSLFIANFVIFVGGAIVFCLTLWTLVDRSFVNELL-----GTNLFSGAVYVLLVTSIIICLVS 73
            :|||:|..||:.:|.|.::..|.:|..|.:. ..|::     |||.|. ||.:|:....||.::.
  Rat     8 LKYSMFFFNFLFWVCGTLILGLAIWLRVSKD-GKEIITSGDNGTNPFI-AVNILIAVGSIIMVLG 70

  Fly    74 FLGCVGAGKEVKCLLLTYFIIVALVFVTMLIGGVLGYVFRER----VQQTMRQEMRSTMALYGSR 134
            ||||.||.||.:|:||.:||.:.|:.:..:..|:||..|:..    :.:|:.:..:.........
  Rat    71 FLGCCGAVKESRCMLLLFFIGLLLILLLQVAAGILGATFKSESSRILNETLYENAKLLSETSNEA 135

  Fly   135 REITQAWDLTQERLQCCGVDTW-HDWNRYGPVPESCCQ------ELFGGQRKECTIFPTITNLYN 192
            :|:.:|....|...:|||:... .||.:..|..:..||      |.:.|:           |:|.
  Rat   136 KEVQKAMIAFQSEFKCCGLRFGAADWGKNFPDAKESCQCTGSDCESYNGE-----------NVYR 189

  Fly   193 QGCLYVTTNFIRDHAAVIGGTSIAVAILMIFGMIFSCLLFNMI 235
            ..||.:....:..:..::.|.:..:|::.|.|::||.:|:..|
  Rat   190 TTCLSLIKELVEKNIIIVIGIAFGLAVIEILGLVFSMVLYCQI 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp74FNP_524132.1 Tetraspanin 14..233 CDD:459767 64/234 (27%)
NET-5_like_LEL 110..207 CDD:239418 19/107 (18%)
Tspan8NP_598210.1 Tetraspanin 8..230 CDD:459767 64/234 (27%)
TM4SF3_like_LEL 106..204 CDD:239407 20/108 (19%)

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