DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp74F and Cd82

DIOPT Version :9

Sequence 1:NP_524132.1 Gene:Tsp74F / 39995 FlyBaseID:FBgn0036769 Length:236 Species:Drosophila melanogaster
Sequence 2:NP_001129527.1 Gene:Cd82 / 12521 MGIID:104651 Length:266 Species:Mus musculus


Alignment Length:261 Identity:68/261 - (26%)
Similarity:124/261 - (47%) Gaps:54/261 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 CGQFVKYSLFIANFVIFVGGAIVFCLTLWTLVDR-SFVNEL--LGTNLFSGAVYVLLVTSIIICL 71
            |.:..||.||:.|.:.|:.||::....:|.|.|: ||::.|  ..::|..|| ||.:....|..:
Mouse     5 CVKVTKYFLFLFNLLFFILGAVILGFGVWILADKNSFISVLQTSSSSLQVGA-YVFIGVGAITIV 68

  Fly    72 VSFLGCVGAGKEVKCLLLTYFIIVALVFVTMLIGGVLGYVFRERVQQ----TMRQEMRSTMALYG 132
            :.||||:||..||:|||..||:.:.|:.:..:..|||.|...:::::    |:...:|:..|...
Mouse    69 MGFLGCIGAVNEVRCLLGLYFVFLLLILIAQVTVGVLFYFNADKLKKEMGNTVMDIIRNYTANAT 133

  Fly   133 SRREITQAWDLTQERLQCCGVDTWHDWNRYGPVPESCCQELFGGQRKECTIFP------------ 185
            |.||  :|||..|.:::|||..:.::|...        :||.|..:   |.:|            
Mouse   134 SSRE--EAWDYVQAQVKCCGWVSHYNWTEN--------EELMGFTK---TTYPCSCEKIKEEDNQ 185

  Fly   186 -------------TITN-------LYNQGCLYVTTNFIRDHAAVIGGTSIAVAILMIFGMIFS-C 229
                         |::.       :..:||:.....:::::..::.|....||::.:.|:..| |
Mouse   186 LIVKKGFCEADNSTVSENNPEDWPVNTEGCMEKAQAWLQENFGILLGVCAGVAVIELLGLFLSIC 250

  Fly   230 L 230
            |
Mouse   251 L 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp74FNP_524132.1 Tetraspannin 14..231 CDD:395265 67/257 (26%)
Cd82NP_001129527.1 CD37_CD82_like_LEL 106..228 CDD:239413 23/134 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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