DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp74F and UPK1A

DIOPT Version :10

Sequence 1:NP_524132.1 Gene:Tsp74F / 39995 FlyBaseID:FBgn0036769 Length:236 Species:Drosophila melanogaster
Sequence 2:XP_054175633.1 Gene:UPK1A / 11045 HGNCID:12577 Length:313 Species:Homo sapiens


Alignment Length:238 Identity:53/238 - (22%)
Similarity:92/238 - (38%) Gaps:49/238 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 LFIANFVIFVGGAIVFCLTLWTLVDRSFVNELLGT----NLFSGAVYVLLVTSIIICLVSFLGCV 78
            |.:.|.:|.:.|..:|..|:|...|:..|..|:|.    ::|:|| ::.:.......:|:..|..
Human    21 LVVGNIIILLSGLSLFAETIWVTADQYRVYPLMGVSGKDDVFAGA-WIAIFCGFSFFMVASFGVG 84

  Fly    79 GAGKEVKCLLLTYFIIVALVFVTMLIGGVLGYVFRERVQQTMRQEMRSTMALYGS----RREITQ 139
            .|....:.::|||.:::.:|::......:..|..|:.:........:..:..|.:    .:|:|:
Human    85 AALCRRRSMVLTYLVLMLIVYIFECASCITSYTHRDYMVSNPSLITKQMLTFYSADTDQGQELTR 149

  Fly   140 AWDLTQERLQCCGVDTWHDWNRYG------------PVPESCCQELFGGQRKECTIFPTITNLYN 192
            .||......:|||.....||..:.            |.|..||       |:.....|    |..
Human   150 LWDRVMIEQECCGTSGPMDWVNFTSAFRAATPEVVFPWPPLCC-------RRTGNFIP----LNE 203

  Fly   193 QGCL-----YVTTNFIRDHAAVIG--------GTS-IAVAILM 221
            :||.     |:.|....:|   ||        |.| ...||||
Human   204 EGCRLGHMDYLFTKGCFEH---IGHAIDSYTWGISWFGFAILM 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp74FNP_524132.1 Tetraspanin 14..233 CDD:459767 53/238 (22%)
NET-5_like_LEL 110..207 CDD:239418 23/117 (20%)
UPK1AXP_054175633.1 Tetraspanin 25..>163 CDD:459767 29/138 (21%)
uroplakin_I_like_LEL 113..231 CDD:239409 26/131 (20%)

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