DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp74F and si:ch73-139j3.4

DIOPT Version :9

Sequence 1:NP_524132.1 Gene:Tsp74F / 39995 FlyBaseID:FBgn0036769 Length:236 Species:Drosophila melanogaster
Sequence 2:XP_005164654.1 Gene:si:ch73-139j3.4 / 101884436 ZFINID:ZDB-GENE-140106-202 Length:355 Species:Danio rerio


Alignment Length:249 Identity:61/249 - (24%)
Similarity:113/249 - (45%) Gaps:38/249 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 QFVKYSLFIANFVIFVGGAIVFCLTLWTLVDR-SFVNELLG---TNLFSGAVYVLLVTSIIICLV 72
            |.:|:...:.|....:.|..:|..:.|.|.|: |||:.|..   ..:.:|.::.:   .:::..|
Zfish     8 QILKFFFMLVNAFFVILGISIFACSAWILFDKDSFVSVLSSGQEVKVVAGGLFFI---GLVVVGV 69

  Fly    73 SFLGCVGAGKEVKCLLLTY--FIIVAL---VFVTMLIGGVLGYVFRERVQQTMRQEMRSTMALYG 132
            |.|||.||..|.:|.::.|  |:||.:   :|:|.::     .:.|:.::|.:|.::...:..||
Zfish    70 SLLGCAGAYFESRCFIIFYLSFLIVIILGQIFITFVL-----LIRRKTIEQFLRDKVDEIIKQYG 129

  Fly   133 SRREITQAW---DLTQERLQCCGVDTWHDWNRYGPV---------PESCCQELFGGQ----RKEC 181
            . .||..:|   |..|...:|||....::|.....:         |.||    |.|.    .:|.
Zfish   130 G-DEIQTSWKLLDSVQTSARCCGRLNSNEWRNNTVIASLGGTDIYPCSC----FNGTCPVILEET 189

  Fly   182 TIFPTITNLYNQGCLYVTTNFIRDHAAVIGGTSIAVAILMIFGMIFSCLLFNMI 235
            ..|...::::.:||.....|::..:..||.|..:|:.::.|...||:...|..|
Zfish   190 YSFGNGSDVFERGCEETLVNWLEMNIIVIFGMDVALILIQIMQFIFAVQTFKCI 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp74FNP_524132.1 Tetraspannin 14..231 CDD:395265 58/241 (24%)
si:ch73-139j3.4XP_005164654.1 Tetraspannin 10..237 CDD:306775 58/239 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.910

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