DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tsp74F and LOC101730599

DIOPT Version :10

Sequence 1:NP_524132.1 Gene:Tsp74F / 39995 FlyBaseID:FBgn0036769 Length:236 Species:Drosophila melanogaster
Sequence 2:XP_017947977.1 Gene:LOC101730599 / 101730599 XenbaseID:XB-GENE-29084703 Length:311 Species:Xenopus tropicalis


Alignment Length:245 Identity:56/245 - (22%)
Similarity:111/245 - (45%) Gaps:24/245 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 FVKYSLFIANFVIFVGGAIVFCLTLWTLVDRSFVNELLGTNLFSGAVYVLLVTSIIICLVSFLGC 77
            :.|:||...:.:..:.|.::.|:.::...:|.....|.|  :|.....:||:..||:..|||:|.
 Frog    16 YSKFSLSFYSTLFSLIGLVILCIGIYAESERQKHRTLEG--IFLAPAVILLLLGIIMFAVSFIGM 78

  Fly    78 VGAGKEVKCLLLTYFIIVALVFVTMLIGGVLGYVFRERVQQTMRQEMRSTMALYGSRREITQAWD 142
            ||:.::...|:..:|.::..:|:..|:..::..||..::::.....:...|..|....:.....|
 Frog    79 VGSLRDNILLVKLFFWVLLAIFLIELLLIIIELVFENQMKKFAHANILVGMQQYYDDLDFKNIMD 143

  Fly   143 LTQERLQCCGVDTWHDW--NRY------GP----VPESCC--QELFGGQRKECTIFPTITN---- 189
            ..||:..|||.|.:.||  |:|      ||    ||.:||  .:..||.:.....:.|:..    
 Frog   144 FVQEKFSCCGGDDFKDWKVNQYHSCNSTGPLACGVPYTCCITGKESGGVKNTLCGYQTLDKERLE 208

  Fly   190 ----LYNQGCLYVTTNFIRDHAAVIGGTSIAVAILMIFGMIFSCLLFNMI 235
                ::.:||::....::.|:..|..|..:|:......|:..|.|.:..:
 Frog   209 VHSIIHVRGCIHAVGLWLGDNYGVTIGLVLALLAPQGLGIGLSYLFWQKL 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp74FNP_524132.1 Tetraspanin 14..233 CDD:459767 56/240 (23%)
NET-5_like_LEL 110..207 CDD:239418 27/118 (23%)
LOC101730599XP_017947977.1 Tetraspanin 17..>154 CDD:459767 32/138 (23%)
penumbra_like_LEL 112..230 CDD:239411 27/117 (23%)

Return to query results.
Submit another query.