DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tsp74F and TSPAN3

DIOPT Version :10

Sequence 1:NP_524132.1 Gene:Tsp74F / 39995 FlyBaseID:FBgn0036769 Length:236 Species:Drosophila melanogaster
Sequence 2:NP_005715.1 Gene:TSPAN3 / 10099 HGNCID:17752 Length:253 Species:Homo sapiens


Alignment Length:250 Identity:62/250 - (24%)
Similarity:110/250 - (44%) Gaps:42/250 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 MDCCGQFVKYSLFIANFVIFVGGAIVFC------LTLWTLVDRSFVNELLGTNLFSGAVYVLLVT 65
            |..||.....::.:...:||.|.|.:.|      ...:...|..|.:           ||.|:..
Human     1 MGQCGITSSKTVLVFLNLIFWGAAGILCYVGAYVFITYDDYDHFFED-----------VYTLIPA 54

  Fly    66 SIIIC------LVSFLGCVGAGKEVKCLLLTYFIIVALVFVTMLIGGVLGYVFRERVQQTMRQEM 124
            .:||.      ::..:||....:|.:|.|.|:.||:.|||||.::..|||||:|.:|:..:.:.:
Human    55 VVIIAVGALLFIIGLIGCCATIRESRCGLATFVIILLLVFVTEVVVVVLGYVYRAKVENEVDRSI 119

  Fly   125 RSTMALYGSRR--EITQAWDLTQERLQCCGVDTWHDW--------NRYGPVPESCCQELFGGQRK 179
            :.....|....  ..::|.|..|.:|.|||:..:.||        .:...||.|||:|    ...
Human   120 QKVYKTYNGTNPDAASRAIDYVQRQLHCCGIHNYSDWENTDWFKETKNQSVPLSCCRE----TAS 180

  Fly   180 ECT---IFPTITNLYNQGCLYVTTNFIRDHAAVIGGTSIAVAILMIFGMIFSCLL 231
            .|.   ..|  ::||.:||..:....:::....:...::|.|.:.:.||:.:|::
Human   181 NCNGSLAHP--SDLYAEGCEALVVKKLQEIMMHVIWAALAFAAIQLLGMLCACIV 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp74FNP_524132.1 Tetraspanin 14..233 CDD:459767 59/242 (24%)
NET-5_like_LEL 110..207 CDD:239418 26/109 (24%)
TSPAN3NP_005715.1 Tetraspanin 9..235 CDD:459767 59/241 (24%)
TM4SF8_like_LEL 104..210 CDD:239416 27/111 (24%)

Return to query results.
Submit another query.