DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tsp74F and XB5867320

DIOPT Version :10

Sequence 1:NP_524132.1 Gene:Tsp74F / 39995 FlyBaseID:FBgn0036769 Length:236 Species:Drosophila melanogaster
Sequence 2:XP_002932228.2 Gene:XB5867320 / 100497410 XenbaseID:XB-GENE-5867321 Length:250 Species:Xenopus tropicalis


Alignment Length:242 Identity:63/242 - (26%)
Similarity:109/242 - (45%) Gaps:31/242 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 FVKYSLFIANFVIFVGGAIVFCLTLWTLVDRSFVNE--LLGTNLFSGAVYVLLVTSIIICLVSFL 75
            |:|.||...:||.::.|..:..:.:||.:.   :.|  :|.||.:.....:||.:...:.|..||
 Frog     3 FLKLSLMAFSFVFWIAGLAMLTVGIWTKIS---LEEYLVLSTNDYPNTPVILLGSGAAVLLWGFL 64

  Fly    76 GCVGAGKEVKCLLLTYFIIVALVFVTMLIGGVLGYVFRERVQQTMRQEMRSTMALYGSRREITQA 140
            ||..|..|.:|||.||.:....|.:..|..|:....:|..:.:..:..:::.:..|....|...|
 Frog    65 GCFSAAAERRCLLRTYGLFQLAVLLAGLAAGLSALFYRRDIAEGFQSGLQNAVQSYAEDEEKADA 129

  Fly   141 WDLTQERLQCCGVDTWHDW-------------NRYG-----PVPESCCQELFGGQRKEC---TIF 184
            .|..|..|.||||.::.||             ..:|     .||.||||     .|:.|   .:.
 Frog   130 LDDIQRALHCCGVHSYQDWFESPWSLEQLEQHQSFGEHSNNSVPSSCCQ-----VRRGCRNNPLL 189

  Fly   185 PTITNLYNQGCLYVTTNFIRDHAAVIGGTSIAVAILMIFGMIFSCLL 231
            |....::..||.....:|:.|:...|..:::.:|::.:.|::.:|||
 Frog   190 PGAPGIHWDGCFKKVCDFVSDNMFYIATSALGLALIQVVGIVLTCLL 236

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp74FNP_524132.1 Tetraspanin 14..233 CDD:459767 62/241 (26%)
NET-5_like_LEL 110..207 CDD:239418 27/117 (23%)
XB5867320XP_002932228.2 Tetraspanin 4..237 CDD:459767 62/241 (26%)
tetraspanin_LEL 100..212 CDD:351888 27/116 (23%)

Return to query results.
Submit another query.