DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp74F and cd53

DIOPT Version :10

Sequence 1:NP_524132.1 Gene:Tsp74F / 39995 FlyBaseID:FBgn0036769 Length:236 Species:Drosophila melanogaster
Sequence 2:XP_002942834.1 Gene:cd53 / 100496085 XenbaseID:XB-GENE-868554 Length:228 Species:Xenopus tropicalis


Alignment Length:219 Identity:61/219 - (27%)
Similarity:115/219 - (52%) Gaps:11/219 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 VKYSLFIANFVIFVGGAIVFCLTLWTLVDRSFVNELLGTNLFSGAVYVLLVTSIIICLVSFLGCV 78
            :||.:|..||:.:|.|..:..:.::.:|:..: .:||..|........|:...|||.:..||||:
 Frog     9 LKYLMFAFNFLFWVTGCSIIAIGIYFVVNNIY-GDLLTNNPSLTVGNALIAIGIIIMVFGFLGCM 72

  Fly    79 GAGKEVKCLLLTYFIIVALVFVTMLIGGVLGYVFRERVQQTMRQEMRSTMALYGSRREITQAWDL 143
            ||.||.||||||:||::.|:.:..:|..:|.:|:.:::...:|..:.|:.. ...::..::.|::
 Frog    73 GAIKENKCLLLTFFILLLLILLAEVIMAILLFVYEKQLDNYVRDRLTSSFE-QNLKQNSSETWNI 136

  Fly   144 TQERLQCCGVDTWHDWNRYGPVPESCCQELFGGQRKECTIFPTITNLYNQGCLYVTTNFIRDHAA 208
            .|..|||||::...||.  ..:|.|||.   .....:|    :..:|:..||.....|:...:..
 Frog   137 IQRNLQCCGINGTKDWK--DNIPNSCCA---SNANSKC----SQADLFKMGCSEALKNWFEKNFL 192

  Fly   209 VIGGTSIAVAILMIFGMIFSCLLF 232
            .:|..:|.::::.:.||.|:..|:
 Frog   193 YVGVGTICISVIEVLGMSFALTLY 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp74FNP_524132.1 Tetraspanin 14..233 CDD:459767 61/219 (28%)
NET-5_like_LEL 110..207 CDD:239418 21/96 (22%)
cd53XP_002942834.1 Tetraspanin 9..217 CDD:459767 61/219 (28%)
tetraspanin_LEL 104..195 CDD:351888 21/100 (21%)

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