DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7402 and arsd

DIOPT Version :9

Sequence 1:NP_649023.1 Gene:CG7402 / 39994 FlyBaseID:FBgn0036768 Length:579 Species:Drosophila melanogaster
Sequence 2:NP_001015952.1 Gene:arsd / 548706 XenbaseID:XB-GENE-5874310 Length:499 Species:Xenopus tropicalis


Alignment Length:579 Identity:132/579 - (22%)
Similarity:200/579 - (34%) Gaps:182/579 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 LTGKYPIHTGMQ-----HFVIITDEPWGLPQRERLMPEIFRDAGYSTHLVGKWHLGF---WRKDL 139
            :||:|||.:||.     ..::......|||..|.....|.:..||||.|:||||||.   .|.|.
 Frog     1 MTGRYPIRSGMDFSNGFRVIVSAAVSAGLPSNETTFATILQQQGYSTGLIGKWHLGLNCASRDDF 65

  Fly   140 T--PTMRGFDHHFG----YYNG------------------------------------------- 155
            .  |...||::.:|    .|:|                                           
 Frog    66 CHHPNSHGFNYFYGMPFSLYSGCKPGSIPESPNSPKQQLSFVTQIIGFGVLTLTALKYSKILAIN 130

  Fly   156 --------------YIDYY------DHQVRMLDRNYSAGLDFRRDLEPCPEANGTYATEAFTSEA 200
                          :|.:|      .|...|:.||:        ::...| .|...:|.....||
 Frog   131 GKFLVSCAVFDLLFFITWYTLYHYAHHWNCMIMRNH--------EITEQP-MNIERSTSQILKEA 186

  Fly   201 KRIIEQHDKSKPLFMVLSHLAVHTGNEDSPMQAPEEEVAKFPHIRDPKRRTYAGMISSLDKSVAQ 265
            ...||: :|:.|..:.:|.|..|.     |:...::...:..|      .||...|..:|..|..
 Frog   187 HGFIER-NKNVPFLLFVSFLHAHI-----PLITTKKFTGRSNH------GTYGDSIEEMDYLVGS 239

  Fly   266 TIGALKDNGMLNNSIILLYSDNGAPTIGIHSN---AGSNYPYRGQKE-SPWEGGIRSAGALWSPL 326
            .:.|:...|:.||:.|...||:|........|   .|.|..|:|.|. :.||||||..|....|.
 Frog   240 VVDAIDTAGLKNNTFIYFTSDHGGHLEAADGNIQLGGWNGIYKGGKAVAGWEGGIRVPGIFRWPG 304

  Fly   327 LKERGYVSNQAIHAVDWLPTLAGAAGVSLPQDLPLDGINLWPMLSGNEEPKPRTMIHVLDE-VFG 390
            :.....|.::....:|..||:....|..||:|..:||.||.|:|.       :..:|...| :|.
 Frog   305 VISPNTVCDEPTSLMDIFPTVIQLGGGELPRDRIIDGRNLMPLLK-------KQALHSEHEFLFH 362

  Fly   391 Y-SSYMRDTLKYVNGSSFKGRYDQWLGELETNEDDPLGESYEQHVLASDVQSLLGNRGLTKDRIR 454
            | .|::...              :|       .:...|..::.|.: :.|.|..|..|....:: 
 Frog   363 YCGSHLHAV--------------RW-------HEKESGTVWKAHFI-TPVFSPEGAGGCYDFKV- 404

  Fly   455 QMRSEATETCP----PIEGQNPLESHFKCEPLKAPCFFDLAKDPCE----RYNLAQMYPLQLQQL 511
                     ||    .:...||            |..||::.||.|    :.:|...|...:.::
 Frog   405 ---------CPCNGDRVTYHNP------------PLLFDISTDPSESSPLQLHLKPQYMQAINRI 448

  Fly   512 ADELEQIRKTAIPSARVPHSDSRANPTFHNGNWEWWNNTDTQSGSGTF-------SINL 563
            ...:|:.::|..|   ||...|     ..|..|..|    .|...|||       .|||
 Frog   449 KHAIEEHQRTISP---VPQQLS-----LTNNFWNPW----LQPCCGTFPFCWCDKDINL 495

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7402NP_649023.1 PRK13759 25..459 CDD:237491 104/458 (23%)
4-S 28..436 CDD:293753 100/435 (23%)
arsdNP_001015952.1 ALP_like 1..468 CDD:390042 122/546 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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