DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7402 and pdcd4

DIOPT Version :10

Sequence 1:NP_649023.1 Gene:CG7402 / 39994 FlyBaseID:FBgn0036768 Length:579 Species:Drosophila melanogaster
Sequence 2:XP_012821786.2 Gene:pdcd4 / 407925 XenbaseID:XB-GENE-959687 Length:484 Species:Xenopus tropicalis


Alignment Length:250 Identity:50/250 - (20%)
Similarity:89/250 - (35%) Gaps:85/250 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   271 KDNGMLNNSIILLYSDNGAPTIGI------------HSNAGSNYPYRGQKESPWEGGIRSAGALW 323
            :|:|. .:|:    ||||....|:            .|..|..   ||   .|.:||....|...
 Frog    63 RDSGR-GDSV----SDNGESARGVLPTSPKAKLMDRKSRTGKG---RG---LPKKGGAGGKGVWG 116

  Fly   324 SP---------LLKERGYVSNQAIHAV--DWLP-----TLAGAAGVSLPQD---LPLDGINLWPM 369
            :|         .:|:..|..:|....:  .|.|     ::.|:...|...:   ||||       
 Frog   117 TPGQIYDEEVVDIKDPNYDEDQKAEFLLRPWQPRACCGSIKGSDQESCVYETTVLPLD------- 174

  Fly   370 LSGNEEPKPRTMIHVLDEVF--GYSSYMRDTLKYVNGSSFKGRYDQWLGELETNEDDPL------ 426
                |:...:::..::.|.|  |.::.:.:.||.:|           |||::...  |:      
 Frog   175 ----EKSFEKSVTPIVQEYFEHGDANEVAEMLKGLN-----------LGEMKCGL--PVLAVSLA 222

  Fly   427 --GESYEQHVLASDVQSLLGNRGLTK------DRIRQMRSEA---TETCPPIEGQ 470
              |::..:.:.:..:..|.|....|:      |::.|...|.   |...|.:.||
 Frog   223 LEGKASHREMTSKLLSHLCGTLLSTEDVERSFDKLLQEMPELVLDTPQAPQLVGQ 277

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7402NP_649023.1 4-S 28..436 CDD:293753 40/205 (20%)
pdcd4XP_012821786.2 MA3 178..289 CDD:214714 20/112 (18%)
MA3 342..455 CDD:214714
Blue background indicates that the domain is not in the aligned region.

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