DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7402 and gnsb

DIOPT Version :9

Sequence 1:NP_649023.1 Gene:CG7402 / 39994 FlyBaseID:FBgn0036768 Length:579 Species:Drosophila melanogaster
Sequence 2:NP_956135.2 Gene:gnsb / 327635 ZFINID:ZDB-GENE-030131-5846 Length:507 Species:Danio rerio


Alignment Length:561 Identity:118/561 - (21%)
Similarity:195/561 - (34%) Gaps:174/561 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KILVLLVVSSILSLAYGSGYSTKPNIVIILIDDMGMNDVSFHGSNQILTP---NIDALAYNGILL 66
            |:|||..      ..:...:|:|.||::||.||   .|....|    :||   ..:.:...|...
Zfish    16 KLLVLFF------FFFTCAFSSKNNIILILTDD---QDEQMGG----MTPMKKTRELIGDAGATF 67

  Fly    67 NKHYVPN-LCTPSRATLLTGKYPIHTGMQHFVII-----------TDEPWGLPQRERLMPEIFRD 119
            :..:... ||.|||::.|:|:|| |..:.|...:           |.||:..|.....|      
Zfish    68 SNAFTSTPLCCPSRSSFLSGRYP-HNHLVHNNSVEGNCSSAAWQKTAEPFAFPVYLNKM------ 125

  Fly   120 AGYSTHLVGKWHLGFWRKD---LTPTMRGFDHHFGYYNGYIDYYDHQVRMLDRNYSAGLDFRRDL 181
             .|.|...||:...:..||   :.....|:|...... |...||::.:.:..:....|..:.:| 
Zfish   126 -RYQTFYCGKYLNQYGSKDAGGVAHVPPGWDQWHALV-GNSKYYNYTLSVNGKEEKHGDSYEKD- 187

  Fly   182 EPCPEANGTYATEAFTSEAKRIIEQHDKSKPLFMVLSHLAVHTGNEDSPMQAPEEEVAKFPHIRD 246
                     |.|:...:.:...:|:...|.|.||:|...|.|     ||..|..:....|..::.
Zfish   188 ---------YLTDLVLNRSLHFLEERSPSHPFFMMLCPPAPH-----SPWTAAPQYSGSFSGVKA 238

  Fly   247 PK----------------------------------RRTYAGMISSLDKSVAQTIGALKDNGMLN 277
            |:                                  ||.:..:: |:|..|.:.:..|.....|:
Zfish   239 PRNGSFNKPGTDKHWLLRQPANPMPNSSIDYLDNAFRRRWQTLL-SVDDLVERLLKKLDSVKELD 302

  Fly   278 NSIILLYSDNGAPTIGIHSNAGSNYPYRGQKESPWE-----------------GGIRSAGALWSP 325
            |:.|...||:|..|              ||...|.:                 .||::...|.||
Zfish   303 NTYIFYTSDHGYHT--------------GQFSLPIDKRQLYEFDIRIPLLVRGPGIKAKQTLQSP 353

  Fly   326 LLKERGYVSNQAIHAVDWLPTLAGAAGVSLPQDLPLDGINLWPMLS---GNEEPKPRTMIHVLDE 387
            :|.            :|...|:...|||:| ..:.:||.:..|.::   .|...:|..::....|
Zfish   354 VLN------------IDLPMTILDIAGVNL-STVNMDGQSFLPQMAPSLRNGTERPFFLVEYTGE 405

  Fly   388 VFGYSSYMRDTLK---------------------YVNGSSFKGRYDQWLGELETNEDDPLGESY- 430
              ||||......|                     |....:.||...|:   .|..:::...|.| 
Zfish   406 --GYSSQDPSCPKLGPGLAECFPDCVCEDAFNNTYACVRTLKGANLQY---CEFADNEAFVEMYN 465

  Fly   431 ---EQHVLASDVQ----SLLGNRGLTKDRIRQMRSEATETC 464
               :.|.|.:.|:    |||   .:...|:.:::|.|.:||
Zfish   466 LTADPHQLENIVKKVDPSLL---QIMNQRLIKLQSCAGDTC 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7402NP_649023.1 PRK13759 25..459 CDD:237491 110/534 (21%)
4-S 28..436 CDD:293753 102/504 (20%)
gnsbNP_956135.2 AslA 34..496 CDD:225661 108/528 (20%)
G6S 34..480 CDD:293766 104/509 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170592897
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

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