DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7402 and Sgsh

DIOPT Version :9

Sequence 1:NP_649023.1 Gene:CG7402 / 39994 FlyBaseID:FBgn0036768 Length:579 Species:Drosophila melanogaster
Sequence 2:NP_061292.2 Gene:Sgsh / 27029 MGIID:1350341 Length:502 Species:Mus musculus


Alignment Length:576 Identity:123/576 - (21%)
Similarity:206/576 - (35%) Gaps:184/576 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 NIVIILIDDMGMNDVSFHGSNQILTPNIDALAYNGILLNKHYVP-NLCTPSRATLLT-------G 85
            |:::|:.||.|. :...:.:..|.||::|||:.:.::....:.. :.|:||||:|||       |
Mouse    24 NVLLIVADDGGF-ESGVYNNTAIATPHLDALSRHSLIFRNAFTSVSSCSPSRASLLTGLPQHQNG 87

  Fly    86 KYPIHTGMQHFVIITDEPWGLPQRERLMPEIFRDAGYSTHLVGKWHLGFWRKDLTPTMRGFDHHF 150
            .|.:|..:.||...        .:.:.:|.:...||..|.::||.|:|      ..|:..||..|
Mouse    88 MYGLHQDVHHFNSF--------DKVQSLPLLLNQAGVRTGIIGKKHVG------PETVYPFDFAF 138

  Fly   151 GYYNGYIDYYDHQVRMLDRNYSAGLDFRRDLEPCPEANGTYATEAFTSEAKRIIE---QHDKSKP 212
            ...|.       .|..:.||                          .:..|::::   |....:|
Mouse   139 TEENS-------SVMQVGRN--------------------------ITRIKQLVQKFLQTQDDRP 170

  Fly   213 LFMVLS----HLAVHT-----------GNEDSPM-QAPEEEVAKFPHIRDPK------------- 248
            .|:.::    |...|:           ||.:|.| ..|:..    |.|.||:             
Mouse   171 FFLYVAFHDPHRCGHSQPQYGTFCEKFGNGESGMGYIPDWT----PQIYDPQDVMVPYFVPDTPA 231

  Fly   249 -RRTYAGM---ISSLDKSVAQTIGALKDNGMLNNSIILLYSDNGAPTIGIHSNAGSNYPYRGQKE 309
             |...|..   |..:|:.|...:..|:..|:||:::|:..||||.|           :| .|:..
Mouse   232 ARADLAAQYTTIGRMDQGVGLVLQELRGAGVLNDTLIIFTSDNGIP-----------FP-SGRTN 284

  Fly   310 SPWEGGIRSAGALWSPLL-------KERGYVSNQAIHAVDWLPTLAGAAGVSLP-------QDLP 360
            ..|.|..       .|||       :..|.||:..:..:|..||:.....:..|       :.:.
Mouse   285 LYWPGTA-------EPLLVSSPEHPQRWGQVSDAYVSLLDLTPTILDWFSIPYPSYAIFGSKTIQ 342

  Fly   361 LDGINLWPMLSGNEEPKPRTMIHVLDEVFGYSSYMRDTLKYVNGSSFKGRYDQWLGELETNEDDP 425
            |.|.:|.|.|..  ||...|       ||...|:...|:.|...|.:...: :.:..|......|
Mouse   343 LTGRSLLPALEA--EPLWAT-------VFSSQSHHEVTMSYPMRSVYHQNF-RLIHNLSFKMPFP 397

  Fly   426 LGESYEQHVLASDVQSLLGNRGLTKDRIRQMRSEATETCPPIEGQNPLESHFKCEPLKAPCFFDL 490
            :.:.:   .::...|.|| ||              |.|..|......|..::..|..:   .:|:
Mouse   398 IDQDF---YVSPTFQDLL-NR--------------TTTGRPTGWYKDLHRYYYRERWE---LYDI 441

  Fly   491 AKDPCERYNLAQMYPLQLQQLADELEQIRKTAIPSARVPHSDSRANPTFHNGNWEW 546
            ::||.|..|||..     ..||..||.::...:                   .|:|
Mouse   442 SRDPRETRNLAAD-----PDLAQVLEMLKAQLV-------------------KWQW 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7402NP_649023.1 PRK13759 25..459 CDD:237491 105/487 (22%)
4-S 28..436 CDD:293753 100/464 (22%)
SgshNP_061292.2 AslA 20..464 CDD:225661 121/546 (22%)
SGSH 24..472 CDD:293751 121/573 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3119
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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