DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7408 and pdcd4

DIOPT Version :10

Sequence 1:NP_649020.1 Gene:CG7408 / 39991 FlyBaseID:FBgn0036765 Length:585 Species:Drosophila melanogaster
Sequence 2:XP_012821786.2 Gene:pdcd4 / 407925 XenbaseID:XB-GENE-959687 Length:484 Species:Xenopus tropicalis


Alignment Length:295 Identity:54/295 - (18%)
Similarity:88/295 - (29%) Gaps:107/295 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   226 LNHLAPHAANDDDPMQAPAEEVSRFEYISNKTH------RYYAAMVSRLDKSVGSVIDALARQEM 284
            :|....:.||.:...:....|..::|...|...      |.:|....||.|:       .:|...
 Frog     9 INANVANVANVESDSELSGAEQIKYEENGNVAESSLTEARLHAKAKRRLRKN-------SSRDSG 66

  Fly   285 LQNSIILFLSDNGGPTQGQHSTTASNYPL-RGQKNSPWEGALRSSAA----IWSTEFERLGSVWK 344
            ..:|:    ||||...:|...|:.....: |..:.....|..:...|    :|.|.    |.::.
 Frog    67 RGDSV----SDNGESARGVLPTSPKAKLMDRKSRTGKGRGLPKKGGAGGKGVWGTP----GQIYD 123

  Fly   345 QQIYIGDLLPTLAAAAGISPDPALHLDG-----LNLW---------------------SALKYGY 383
            :::.  |:           .||....|.     |..|                     :.|....
 Frog   124 EEVV--DI-----------KDPNYDEDQKAEFLLRPWQPRACCGSIKGSDQESCVYETTVLPLDE 175

  Fly   384 ESVEREIVHVIDE--------DVAEPHLSYTRGKWKVISGTTNQGL--------YDGWLGHRE-- 430
            :|.|:.:..::.|        :|||.......|:.|.       ||        .:|...|||  
 Frog   176 KSFEKSVTPIVQEYFEHGDANEVAEMLKGLNLGEMKC-------GLPVLAVSLALEGKASHREMT 233

  Fly   431 -------------TSEV----DPRAVEYEELVRNT 448
                         |.:|    |....|..|||.:|
 Frog   234 SKLLSHLCGTLLSTEDVERSFDKLLQEMPELVLDT 268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7408NP_649020.1 4-S 35..423 CDD:293753 42/249 (17%)
pdcd4XP_012821786.2 MA3 178..289 CDD:214714 21/98 (21%)
MA3 342..455 CDD:214714
Blue background indicates that the domain is not in the aligned region.

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