DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7408 and sts

DIOPT Version :9

Sequence 1:NP_001163462.1 Gene:CG7408 / 39991 FlyBaseID:FBgn0036765 Length:585 Species:Drosophila melanogaster
Sequence 2:XP_005168454.1 Gene:sts / 402795 ZFINID:ZDB-GENE-030717-5 Length:584 Species:Danio rerio


Alignment Length:614 Identity:132/614 - (21%)
Similarity:212/614 - (34%) Gaps:192/614 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 CIALSNGIVATSDKPNIIIIMADDLGFDDVSFRGSNNFLTPNIDALAYSGV-ILNNLYVAPMCTP 84
            |:.|......:..|||.:.:|.||||..|:...|:....|||||.||..|| :..::..||:|||
Zfish    12 CLLLYTADAGSGTKPNFVFMMVDDLGIGDLGCYGNTTLRTPNIDRLALEGVKLTQHIAAAPLCTP 76

  Fly    85 SRAALLTGKYPINTGMQHY-----VIVNDQPWGLPLNETTMAEIFRENGYRTSLLGKWHLGL--- 141
            ||||.|||:|||.:||..:     .:.:....|||..|.|.|:..:..||.|:::|||||||   
Zfish    77 SRAAFLTGRYPIRSGMAAHGHMGVFLFSASSGGLPQEEITFAKAVKVQGYSTAVIGKWHLGLNCE 141

  Fly   142 --SQRNFTPTERGFDRHLGYLGAYVDYYTQSYEQQNKGYNGHDFRDSLKSTHDHVGH-------- 196
              |.....|...|||...|.:..::          .....||.  ..|.:.:.|:..        
Zfish   142 DSSDHCHHPNSHGFDYFYGTIMTHL----------RDCQPGHG--SVLYNVYSHIPFKPLSIGLV 194

  Fly   197 --------------------------------------------------------YVTDLLTDA 205
                                                                    |:::.||..
Zfish   195 SLVVLHIRGMLTVSRRVFFSFLILVGLVLSLFRLLVYTFPNLNCFVMRGTEIVEQPYISENLTQR 259

  Fly   206 AVKEIEDHGSKNSSQPLFLLLNHLAPHAANDDDPMQAPAEEVSRFEYISNKTHRYYAAMVSRLDK 270
            ...|..:...:||..|..|..:.:..|......|:           :.....|..|...|..:|.
Zfish   260 MTSEAIEFLERNSETPFLLFFSFIQVHTGVFASPL-----------FRGRSQHGLYGDAVMEVDW 313

  Fly   271 SVGSVIDALARQEMLQNSIILFLSDNG---------GPTQGQHSTTASNYPLRGQKNSPWEGALR 326
            |||.::..|.|..:..|:::...||.|         |...|.:|..     .:..|::.|||.:|
Zfish   314 SVGQIMQTLERLNLKDNTLVYMTSDQGPHLEEISVHGEMHGGYSGI-----YKAGKSTNWEGGIR 373

  Fly   327 SSAAIWSTEFERLGSVWKQQIYIGDLLPTLAAAAGIS-PDPALHLDGLNLWSALKYGYESVEREI 390
            ....:........|::..:.....|:.||:...||.| ||..: :||.:|...|:...:..|.|:
Zfish   374 IPGILSWPGVLPAGNIIDEPTSNMDIFPTVLNLAGASIPDDRV-IDGHDLLPLLQGQVKRSEHEL 437

  Fly   391 V-HVIDEDVAEPHLSYTRGKWKVISGTTNQGLYDGWLGHRETSEVDPRAVEYEELVRNTSVWLQL 454
            : |..:.::       ...:|:..:.:..      |.....|.:..|         :|:|.... 
Zfish   438 LFHYCNAEL-------NAVRWRPPNSSAI------WKAFFFTPDFYP---------KNSSACFH- 479

  Fly   455 QQVSFGERNISELRDQSRIECPDPATGVKPCLPL-EGPCLFDIEADPCERSNLYAEYQNSTIFLD 518
            ..|.|               |      :||.:.. :.|.|:|:..||.|                
Zfish   480 THVCF---------------C------IKPFVTFHDPPLLYDLSKDPTE---------------- 507

  Fly   519 LWSRIQQFAKQAHPPNNKPGDPNCDPRFY 547
                            :.|..|:.:|:|:
Zfish   508 ----------------STPLSPDTEPQFH 520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7408NP_001163462.1 AslA 31..425 CDD:225661 110/479 (23%)
4-S 35..423 CDD:293753 109/473 (23%)
stsXP_005168454.1 PRK13759 23..533 CDD:237491 130/603 (22%)
ES 25..546 CDD:293778 130/601 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170592923
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.840

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