DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7408 and Ids

DIOPT Version :9

Sequence 1:NP_001163462.1 Gene:CG7408 / 39991 FlyBaseID:FBgn0036765 Length:585 Species:Drosophila melanogaster
Sequence 2:NP_647814.1 Gene:Ids / 38423 FlyBaseID:FBgn0035445 Length:512 Species:Drosophila melanogaster


Alignment Length:604 Identity:131/604 - (21%)
Similarity:202/604 - (33%) Gaps:197/604 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 LLTGFVLCIALSNGIVATSDKPNIIIIMADDLGFDDVSFRGSNNFLTPNIDALAYSGVILNNLY- 77
            ||...::.:.|.  ..|...:||:::::.|||. ..:...|.....||.:|..|....|...:| 
  Fly     6 LLLSLMMPVLLD--AAAPPRRPNVVMVIFDDLR-PVIGAYGDTLASTPYLDNFARGSHIFTRVYS 67

  Fly    78 VAPMCTPSRAALLTGKYPINTGMQHYVIVNDQPW----GLPLNETTMAEIFRENGYRTSLLGK-W 137
            ...:|.|||.:||||:.|....:..:.    ..|    |   |.||:.:.|:|:||.|...|| :
  Fly    68 QQSLCAPSRNSLLTGRRPDTLHLYDFY----SYWRTFTG---NFTTLPQYFKEHGYYTYSCGKVF 125

  Fly   138 HLGLSQRN------------FTPTERGF-------DRHLGYLG----AYVDYYTQSYEQQNKGYN 179
            |.|||..|            |.|....|       |:. |.|.    ..|:..||.|:.      
  Fly   126 HPGLSSNNTDDYPLSWSAPAFRPRTEQFMNSPVCPDKE-GILRKNLICPVELQTQPYKT------ 183

  Fly   180 GHDFRDSLKSTHDHVGHYVTDLLTDAAVKEIEDHGSKNSSQPLFLLLNHLAPHAANDDDPMQAPA 244
                              :.|:.:.|.........|::|.:|.||.:....||.     ..:.|.
  Fly   184 ------------------LPDIESVAEALRFVGSRSRHSQEPFFLAMGFHKPHI-----NFRFPR 225

  Fly   245 EEVSRFEYI----------------------------------SNKTHRY--------------Y 261
            :.:|||...                                  ||.:..|              |
  Fly   226 QFLSRFNLSQFYNYTEDSLKPPDMPAVAWNPYTDVRARDDFKHSNISFPYGPISPLQAAQIRQSY 290

  Fly   262 AAMVSRLDKSVGSVIDALARQEMLQNSIILFLSDNGGPTQGQHSTTASNYPLRGQKNSPWEGALR 326
            .|.||.:|...|.:|..|.    |..::::.|.|:|. :.|:|:..|        |.|.:|.|||
  Fly   291 YASVSYVDDLFGKLIGGLD----LDETVVVALGDHGW-SLGEHAEWA--------KYSNFEVALR 342

  Fly   327 SSAAIWSTEFERLGSVWKQQIYIG-----DLLPTLAAAAGISPDPALHL----------DGLNLW 376
            ....|.|.:|    .|.:.:.|.|     |:.|||...||:   |.|..          :|.:|:
  Fly   343 VPLIIRSPQF----PVAQTKYYHGITELLDVFPTLVDLAGL---PKLDKCQSSQELTCGEGKSLY 400

  Fly   377 SALKYGYESVEREIVHVIDEDVAEPHLSYTRGKWKVISGTTNQGLYDGWLGHRETSEVDPRAVEY 441
            ..|.    .:.|...||.......|.:..|:                    |..:.:...|.::.
  Fly   401 HQLM----GLGRADEHVALSQYPRPGMLPTK--------------------HPNSDKPKLRNIKI 441

  Fly   442 EELVRNTSVWLQLQQVSFGERNISELRDQSRIECPDPATGVKPCLPLEGPCLFDIEADPCERSNL 506
            ......|.::.....|.|..:|.|  ||...:               .|..|:|...|..|..||
  Fly   442 MGYSLRTDIYRYTMWVRFHAQNFS--RDWHDV---------------YGEELYDHRLDSGEELNL 489

  Fly   507 YAEYQNSTIFLDLWSRIQQ 525
            ....|    |.|:..|:::
  Fly   490 MPLPQ----FDDVRQRLRR 504

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7408NP_001163462.1 AslA 31..425 CDD:225661 107/485 (22%)
4-S 35..423 CDD:293753 107/479 (22%)
IdsNP_647814.1 AslA 21..509 CDD:225661 127/587 (22%)
iduronate-2-sulfatase 24..495 CDD:293754 124/573 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466507
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3119
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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