DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7408 and Arsk

DIOPT Version :10

Sequence 1:NP_649020.1 Gene:CG7408 / 39991 FlyBaseID:FBgn0036765 Length:585 Species:Drosophila melanogaster
Sequence 2:NP_001041382.1 Gene:Arsk / 365619 RGDID:1310182 Length:563 Species:Rattus norvegicus


Alignment Length:651 Identity:123/651 - (18%)
Similarity:209/651 - (32%) Gaps:240/651 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 LLTGFVLCIALSNGIVATSDK-------PNIIIIMADDLGFDD-VSFR-GSNNFLTPNIDALAYS 69
            ||...::.:||......|.:|       ||::::.:|  .||. ::|: ||.....|.|:.:...
  Rat     4 LLVSVIVALALVAPAPETQEKRLQVAQAPNVVLVASD--SFDGRLTFQPGSQVVKLPFINFMRAR 66

  Fly    70 GVILNNLYV-APMCTPSRAALLTGKYPINTGMQHYVIVNDQPW----GLPLNETTMAEIFRENGY 129
            |....|.|. :|:|.|||||:.:|.:...|          :.|    ||..|.||..::..::||
  Rat    67 GTTFLNAYTNSPICCPSRAAMWSGLFTHLT----------ESWNNFKGLDPNYTTWMDVMEKHGY 121

  Fly   130 RTSLLGKWHLGLSQRNFTPTERGFDRHLGYLGAYVDYYTQSYEQQNKGYNGHDFRDSLKSTHDHV 194
            :|...||........:.:.....:.|.:.:|          ..|:                    
  Rat   122 QTQKFGKLDYSSGHHSISNRVEAWTRDVAFL----------LRQE-------------------- 156

  Fly   195 GHYVTDLLTDAAVKEIEDHG------------SKNSSQPLFLLLNHLAPHAANDDDPMQAPA--- 244
            |..:.:|:.|...:.:.|..            ..||::|..|.|....||      |..:|:   
  Rat   157 GRPIINLIPDKNRRRVMDKDWQNTDKAIAWLRQVNSTKPFVLYLGLNLPH------PYPSPSSGE 215

  Fly   245 ------------------------------EEVSRFEYISNKT---------------HRYYAAM 264
                                          .|:...:|.|:.|               ..:|.||
  Rat   216 NFGSSTFHTSLYWLEKVAYDAIKIPKWLALSEMHPVDYYSSYTKNCTGKFTENEIKNIRAFYYAM 280

  Fly   265 VSRLDKSVGSVIDALARQEMLQNSIILFLSDNGGPTQGQHSTTASNYPLRGQKNSPWEGALRSSA 329
            .:..|..:|.:|.||.:..:||.:|:::.||:|.... :|.        :..|.|.:|.:.....
  Rat   281 CAETDAMLGEIILALHKLNLLQKTIVIYTSDHGEMAM-EHR--------QFYKMSMYEASAHVPI 336

  Fly   330 AIWSTEFERLGSVWKQQIYIG------DLLPTLAAAAGISPDPALHLDGLNLWSALKYGYESVER 388
            .:       :|...|..:.:.      |:.||:...||| |.| |:|.|.:|.........:.:.
  Rat   337 LM-------MGPGIKANLQVPSLVSLVDIYPTMLDIAGI-PLP-LNLSGYSLLPLSSNTSANDQA 392

  Fly   389 EIVHVIDEDVAEPHLSYTRGKWKVISGTTNQGLYDGWLGHRETSEVDPRAVEYEELVRNTSVWL- 452
            ..||                             :..|:           ..|:.....|.|.:: 
  Rat   393 FRVH-----------------------------HPPWI-----------LSEFHGCNANASTYML 417

  Fly   453 ---QLQQVSFGERNISELRDQSRIECPDPATGVKPCLPLEGPCLFDIEADPCERSNLYAEYQNST 514
               |.:.:::.:..:.:                        |.|||:..||.|.:|:..|:...|
  Rat   418 RTGQWKYIAYSDGTLVQ------------------------PQLFDLSLDPDELTNIATEFPEIT 458

  Fly   515 IFLDLWSRI----------------QQFA--KQAHPPNNK--------PGDPNCDPRFYHNEWTW 553
            ..||...|.                :||.  ||:...|..        ..|...|||.|.|....
  Rat   459 YSLDQQLRSVINYPKVSASVHRYNKEQFIMWKQSVAQNYSNYIAHLRWHQDWQKDPRKYENAIQR 523

  Fly   554 W 554
            |
  Rat   524 W 524

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7408NP_649020.1 4-S 35..423 CDD:293753 87/460 (19%)
ArskNP_001041382.1 ARSK 32..445 CDD:293781 97/542 (18%)

Return to query results.
Submit another query.