DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7408 and Arsa

DIOPT Version :10

Sequence 1:NP_649020.1 Gene:CG7408 / 39991 FlyBaseID:FBgn0036765 Length:585 Species:Drosophila melanogaster
Sequence 2:NP_001030105.2 Gene:Arsa / 315222 RGDID:1310381 Length:507 Species:Rattus norvegicus


Alignment Length:601 Identity:157/601 - (26%)
Similarity:222/601 - (36%) Gaps:188/601 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 LCIALSNGIVATSDKPNIIIIMADDLGFDDVSFRGSNNFLTPNIDALAYSGVILNNLYV-APMCT 83
            |.:||:.|: :|:..|||::|.|||||:.|:...|..:..|||:|.||..|:...:.|| ..:||
  Rat     7 LVLALAAGL-STASPPNIMLIFADDLGYGDLGSYGHPSSTTPNLDQLAAGGLRFTDFYVPVSLCT 70

  Fly    84 PSRAALLTGKYPINTGMQHYVIVNDQPWGLPLNETTMAEIFRENGYRTSLLGKWHLGLSQRN-FT 147
            |||||||||:.|:.:||...|:......||||.|.|:||:....||.|.:.||||||:.... |.
  Rat    71 PSRAALLTGRLPVRSGMYPGVLGPSSQGGLPLEEVTLAEVLAARGYLTGMAGKWHLGVGPEGAFL 135

  Fly   148 PTERGFDRHLGYLGAYVDYYTQSYEQ---QNKGYNGHDFRDS----------------------- 186
            |..:||.|.||     :.|   |::|   ||......|...|                       
  Rat   136 PPHQGFHRFLG-----IPY---SHDQGPCQNLTCFPPDITCSGGCDQGLVPIPLLANLTVEAQPP 192

  Fly   187 -LKSTHDHVGHYVTDLLTDAAVKEIEDHGSKNSSQPLFLLLNHLAPHAANDDDPMQAPAEEVSRF 250
             |.........:..||:.||          :...:|.||.                         
  Rat   193 WLPGLEARYVSFSRDLMADA----------QRQGRPFFLY------------------------- 222

  Fly   251 EYISNKTHRY----------------YAAMVSRLDKSVGSVIDALARQEMLQNSIILFLSDNGGP 299
             |.|:.|| |                :...:..||.:||:::.|:....:|..::::|.:|| ||
  Rat   223 -YASHHTH-YPQFSGQSFTKRSGRGPFGDSLMELDGAVGALMTAVGDLGLLGETLVIFTADN-GP 284

  Fly   300 TQGQHSTTASNYPLRGQKNSPWEGALRSSAAIWSTEFERLGSVWKQQIYIG---------DLLPT 355
            ...:.|....:..||..|.:.:||.:|..|.::          |...|..|         |||||
  Rat   285 ELMRMSDGGCSGLLRCGKGTTFEGGVREPALVY----------WPGHITPGVTHELASSLDLLPT 339

  Fly   356 LAAAAGISPDPALHLDGLNLWSALKYGYESVEREIVHVIDEDVAEPHLSYTRGKWKVISGTTNQG 420
            |||..| :|.|.:.|||::: |.|..|.....|..|........|.|     |.:.|.:|.....
  Rat   340 LAALTG-APLPNITLDGVDI-SPLLLGTGKSPRNSVFFYPPFPDEIH-----GVFAVRNGKYKAH 397

  Fly   421 LYDGWLGHRETSEVDPRAVEYEELVRNTSVWLQLQQVSFGERNISELRDQSRIECPDPATGVKPC 485
            .:.....|.:|:                                           ||||......
  Rat   398 FFTQGSAHSDTT-------------------------------------------PDPACHAANR 419

  Fly   486 LPL-EGPCLFDIEADPCERSNLY---------------------AEYQNSTIFLDLWSRIQQFAK 528
            |.. |.|.|:|:..||.|..||.                     |||..:..|..     .|.||
  Rat   420 LTAHEPPLLYDLSKDPGENYNLLDSTEEVSPEALQALKHIELLKAEYDAAMTFSP-----SQIAK 479

  Fly   529 QAHPPNNKPGDPNCDP 544
            ...|.......|:|.|
  Rat   480 GEDPALQICCQPSCTP 495

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7408NP_649020.1 4-S 35..423 CDD:293753 125/441 (28%)
ArsaNP_001030105.2 ALP_like 20..503 CDD:474031 152/587 (26%)

Return to query results.
Submit another query.