DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7408 and Arsl

DIOPT Version :10

Sequence 1:NP_649020.1 Gene:CG7408 / 39991 FlyBaseID:FBgn0036765 Length:585 Species:Drosophila melanogaster
Sequence 2:NP_001041350.1 Gene:Arsl / 310326 RGDID:1304917 Length:611 Species:Rattus norvegicus


Alignment Length:612 Identity:157/612 - (25%)
Similarity:223/612 - (36%) Gaps:164/612 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 SSATSLLTGFVLCIALSNGIVATSDKPNIIIIMADDLGFDDVSFRGSNNFLTPNIDALAYSGVIL 73
            ||..:||...:|.:...:.:.:...:||.:||||||||..|:...|:.:..|||||.||..||.|
  Rat     9 SSPATLLCIVLLGLQYVDALRSPPPRPNFLIIMADDLGIGDLGCYGNTSIRTPNIDRLAEDGVRL 73

  Fly    74 NNLYVA-PMCTPSRAALLTGKYPINTGMQ----HYVIVNDQPW-----GLPLNETTMAEIFRENG 128
            .....| .:|||||||.|||:|||.:||.    |.|:    .|     |||..|.|.|.|.:..|
  Rat    74 TQYLAAESVCTPSRAAFLTGRYPIRSGMTSGNGHRVL----QWAAGAGGLPPKEITFARILQGQG 134

  Fly   129 YRTSLLGKWHLGLSQRNFT-----PTERGFDRHLGY--------LGAYVDYYTQSYEQQNKGY-- 178
            |.|.|:||||||||.|..:     |...||...||.        .||.........|::.:|.  
  Rat   135 YVTGLVGKWHLGLSCRTVSDLCHHPLNHGFHHFLGLPLGMMGDCAGAEPSEKRAGLERRLRGAGR 199

  Fly   179 ---------------NGHDFRDSLKSTHDHV-----------GHYVT------------------ 199
                           .|.....:..:....:           |.||.                  
  Rat   200 ALAAVAVAIAALAWGRGRGLAPACWAPWAAIALGAVAAIFEAGSYVVGGAVARYDCFLMRNATVT 264

  Fly   200 ------DLLTDAAVKEIEDHGSKNSSQPLFLLLNHLAPHAANDDDPMQAPAEEVSRFEYISNKTH 258
                  |.:|...::|.:|...::...|..|.|:.|..|.     |:      |:..|:.....|
  Rat   265 QQPLQLDHVTPLLLREAKDFLRRHRHAPFLLFLSLLHTHT-----PL------VTSPEFRGRSAH 318

  Fly   259 RYYAAMVSRLDKSVGSVIDALARQEMLQNSIILFLSDNGGPTQGQ---HSTTASNYPLRGQKN-S 319
            ..|...|..:|..||.:::.|..:.:..::::.|.||||...:.|   .....||...||.|. .
  Rat   319 GRYGDNVEEMDWVVGQILEVLEHEGLTDSTLVHFTSDNGAWLEAQAGGEQLGGSNGVFRGGKGMG 383

  Fly   320 PWEGALRSSAAI-WSTEFERLGSVWKQQIYIGDLLPTLA-AAAGISPDPALHLDGLNLWSALK-Y 381
            .|||.:|..... |.....| |.|..|.:.:.|:.||:. ...|:.|... .:||.:|...|: .
  Rat   384 GWEGGIRVPGVFRWPGVLPR-GRVLDQPVSLMDVFPTVVRLGGGVLPSDR-EIDGRDLLPLLRGE 446

  Fly   382 GYESVEREIVHVIDEDVAEPHLSYTRGKWKVISGTTNQGLYDGWLGHRETSEVDPRAVEYEELVR 446
            .:.|....::|     ..|..|...|  |  :...:.|    .|..|..|...||          
  Rat   447 TWHSAHEVLLH-----YCEVFLHAVR--W--VQRDSGQ----VWKAHFVTPTFDP---------- 488

  Fly   447 NTSVWLQLQQVSFGERNISELRDQSRIECPDPATGVKPCL----PLEGPCLFDIEADPCERSNLY 507
                        .|..:.|.         ...|..|.||:    ..:.|.||::.:||.|...|.
  Rat   489 ------------LGSGSCSG---------AGGAAAVCPCVGKVEEHDPPLLFELTSDPGEVRPLR 532

  Fly   508 AEYQNSTIFLDLWSRIQQFAKQAHPPN 534
            |.                 ||.:..||
  Rat   533 AP-----------------AKMSEAPN 542

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7408NP_649020.1 4-S 35..423 CDD:293753 129/469 (28%)
ArslNP_001041350.1 ALP_like 34..531 CDD:474031 146/557 (26%)

Return to query results.
Submit another query.