DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7408 and Sgsh

DIOPT Version :9

Sequence 1:NP_001163462.1 Gene:CG7408 / 39991 FlyBaseID:FBgn0036765 Length:585 Species:Drosophila melanogaster
Sequence 2:NP_061292.2 Gene:Sgsh / 27029 MGIID:1350341 Length:502 Species:Mus musculus


Alignment Length:599 Identity:136/599 - (22%)
Similarity:223/599 - (37%) Gaps:167/599 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 GFVLC-IALSNGIVATSDKPNIIIIMADDLGFDDVSFRGSNN--FLTPNIDALAYSGVILNNLYV 78
            |...| |.|..|:.....: |:::|:|||.||:...:   ||  ..||::|||:...:|..|.:.
Mouse     5 GLACCTILLVLGLCGAHSR-NVLLIVADDGGFESGVY---NNTAIATPHLDALSRHSLIFRNAFT 65

  Fly    79 A-PMCTPSRAALLTGKYPINTGMQ------HYVIVNDQPWGLPLNETTMAEIFRENGYRTSLLGK 136
            : ..|:||||:||||......||.      |:....|:...|||       :..:.|.||.::||
Mouse    66 SVSSCSPSRASLLTGLPQHQNGMYGLHQDVHHFNSFDKVQSLPL-------LLNQAGVRTGIIGK 123

  Fly   137 WHLGLSQRNFTPTERGFDRHLGYLGAYVDYYTQSYEQQNKGYNGHDFRDSLKSTHDHVGHYVTDL 201
            .|:|      ..|...||              .::.::|             |:...||..:|  
Mouse   124 KHVG------PETVYPFD--------------FAFTEEN-------------SSVMQVGRNIT-- 153

  Fly   202 LTDAAVKE-IEDHGSKNSSQPLFLLLNHLAPHAANDDDPMQAP-AEEVSRFE----YISNKTHRY 260
                .:|: ::........:|.||.:....||......|.... .|:....|    ||.:.|.:.
Mouse   154 ----RIKQLVQKFLQTQDDRPFFLYVAFHDPHRCGHSQPQYGTFCEKFGNGESGMGYIPDWTPQI 214

  Fly   261 Y---------------------AAM---VSRLDKSVGSVIDALARQEMLQNSIILFLSDNGGPTQ 301
            |                     ||.   :.|:|:.||.|:..|....:|.:::|:|.||||.|  
Mouse   215 YDPQDVMVPYFVPDTPAARADLAAQYTTIGRMDQGVGLVLQELRGAGVLNDTLIIFTSDNGIP-- 277

  Fly   302 GQHSTTASNYPLRGQKNSPWEGALRSSAAIWSTEFERLGSVWKQQIYIGDLLPTLAAAAGISPDP 366
                     :| .|:.|..|.|.............:|.|.|....:.:.||.||:          
Mouse   278 ---------FP-SGRTNLYWPGTAEPLLVSSPEHPQRWGQVSDAYVSLLDLTPTI---------- 322

  Fly   367 ALHLDGLNLWSALKY------GYESVE---REIVHVIDEDVAEPHLSYTRGKWKVISGTTNQGLY 422
               ||    |.::.|      |.::::   |.::..::   |||       .|..:..:.:.   
Mouse   323 ---LD----WFSIPYPSYAIFGSKTIQLTGRSLLPALE---AEP-------LWATVFSSQSH--- 367

  Fly   423 DGWLGHRETSEVDPRAVEYE--ELVRNTSVWL--QLQQVSFGERNISELRDQSRIECPDPATGVK 483
                 |..|.....|:|.::  .|:.|.|..:  .:.|..:......:|.:::....|   ||..
Mouse   368 -----HEVTMSYPMRSVYHQNFRLIHNLSFKMPFPIDQDFYVSPTFQDLLNRTTTGRP---TGWY 424

  Fly   484 PCLP----LEGPCLFDIEADPCERSNLYAEYQNSTIFLDLWSRIQQFAKQAHPPNNKPGD----- 539
            ..|.    .|...|:||..||.|..||.|:...:.:...|.:::.::..:.|.|.....|     
Mouse   425 KDLHRYYYRERWELYDISRDPRETRNLAADPDLAQVLEMLKAQLVKWQWETHDPWVCAPDGVLEE 489

  Fly   540 ---PNCDPRFYHNE 550
               |.|.|  .|||
Mouse   490 KLTPQCRP--LHNE 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7408NP_001163462.1 AslA 31..425 CDD:225661 98/441 (22%)
4-S 35..423 CDD:293753 98/435 (23%)
SgshNP_061292.2 AslA 20..464 CDD:225661 121/543 (22%)
SGSH 24..472 CDD:293751 122/546 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3119
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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