DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7408 and galns

DIOPT Version :9

Sequence 1:NP_001163462.1 Gene:CG7408 / 39991 FlyBaseID:FBgn0036765 Length:585 Species:Drosophila melanogaster
Sequence 2:XP_002933701.2 Gene:galns / 100485376 XenbaseID:XB-GENE-1000591 Length:520 Species:Xenopus tropicalis


Alignment Length:575 Identity:153/575 - (26%)
Similarity:237/575 - (41%) Gaps:138/575 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 SLLTGFVLCIALSNGIVATSDKPNIIIIMADDLGFDDVSFRGSNNFLTPNIDALAYSGVILNNLY 77
            :|..||:..:.:..|:..|  :|||::::.||:|:.|:...|..:..|||:|.:|..|::..|.|
 Frog     8 ALALGFLNPVLVLGGMNGT--RPNILLLLMDDMGWGDLGVFGEPSRETPNLDKMASEGMLFPNFY 70

  Fly    78 VA-PMCTPSRAALLTGKYPINTGMQHYVIVNDQP----------WGLPLNETTMAEIFRENGYRT 131
            .| |:|:|||||||||:.||..|   :...|...          .|:|.:|....|:.::.||..
 Frog    71 TANPLCSPSRAALLTGRLPIRNG---FYTTNSHARNAYTPQEIMGGIPDSEVLFPELLKKAGYVN 132

  Fly   132 SLLGKWHLGLSQRNFTPTERGFDRHLG----YLGAYVDYYTQSYEQQNKGY-NGHDFRDSLKSTH 191
            .::|||||| .:.::.|..||||...|    :.|.|          .||.. |...:||     .
 Frog   133 KIIGKWHLG-HRPSYHPLRRGFDEWFGSPNCHFGPY----------DNKQRPNIPVYRD-----W 181

  Fly   192 DHVGHYVTDL----------LTDAAVKEIEDHGSKNS--SQPLFLLLNHLAPHAANDDDPMQAPA 244
            |.||.|..|.          ||...::|..:..::.:  .||.||..:..|.||     |:.|  
 Frog   182 DMVGRYYEDFNIDHKTGESNLTQIYLQEALEFINRQAGDQQPFFLYWSIDATHA-----PVYA-- 239

  Fly   245 EEVSRFEYISNKTHRYYAAMVSRLDKSVGSVIDALARQEMLQNSIILFLSDNG-----GPTQGQH 304
               || .::.......|...|..:|.|:|.::..|.::::::::.:.|.||||     .|.||  
 Frog   240 ---SR-PFLGTSRRGLYGDAVREIDFSIGKILGLLNQKDIIKDTFVFFTSDNGAALISAPMQG-- 298

  Fly   305 STTASNYPLRGQKNSPWEGALRSSAAIWSTEFERLGSVWKQQIYIGDLLPTLAAAAGISPDPALH 369
               .||.|....|.:.:||.:|.....|.......|.|..|...|.||..|..:.||:.......
 Frog   299 ---GSNGPFLCGKQTTFEGGMRVPGIAWWPGHVAPGQVSYQLGSIMDLFTTSLSLAGVEIPKDRA 360

  Fly   370 LDGLNLWSALKYGYESVEREIVHVIDEDVAEPHLSYTRGKWKVISGTTNQGLYDGWLGHRETSEV 434
            :||::|...:   .||.|.|          .|...|...:...:....::..|..|         
 Frog   361 IDGIDLSPVI---LESEETE----------RPIFYYRGNELMAVRLGQHKAHYWTW--------- 403

  Fly   435 DPRAVEYEELVRNTSVWLQLQQ-VSFGERNISELRDQSRIECP-DPATGVKPCLPLE---GPCLF 494
                         ::.|.:|.| ::|               || ...|||...:.:|   .|.||
 Frog   404 -------------SNSWEELSQGINF---------------CPGQNITGVTTHVQVEHSINPLLF 440

  Fly   495 DIEADPCER---SNLYAEYQNSTIFLDLWSRIQQFAKQAHPPNNKPGDPN---CD 543
            .:..||.|:   |.|..||:.:.      |||....:| |..:..||:|.   ||
 Frog   441 HLGRDPGEKYSISVLSTEYEAAL------SRISPVVQQ-HRNSMVPGEPQLNVCD 488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7408NP_001163462.1 AslA 31..425 CDD:225661 118/426 (28%)
4-S 35..423 CDD:293753 116/420 (28%)
galnsXP_002933701.2 GALNS 27..492 CDD:293776 148/554 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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