DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5535 and yjeM

DIOPT Version :10

Sequence 1:NP_649019.2 Gene:CG5535 / 39990 FlyBaseID:FBgn0036764 Length:630 Species:Drosophila melanogaster
Sequence 2:NP_418580.2 Gene:yjeM / 948679 ECOCYCID:EG12475 Length:500 Species:Escherichia coli


Alignment Length:563 Identity:116/563 - (20%)
Similarity:208/563 - (36%) Gaps:155/563 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 LTALGIGSTLGVGVYVLAGEVSKQY-AGPAVVVSFLIAAIASIFAGLCYAEFGARVPKAGSAY-- 106
            ::.:|:...:...|:..|...|..| .|.:.:..::.:|:      |.:..|...:.:.|:||  
E. coli     8 MSLIGLILMIFTSVFGFANSPSAYYLMGYSAIPFYIFSAL------LFFIPFALMMAEMGAAYRK 66

  Fly   107 ----IYSYV--TIGEFIAFLIGWNLILEYAIGSASVVKGLSTYLDQLCGNPMSSFL-GTHMPLNI 164
                |||::  ::|...||:..:.....|.|...|....:..        |.|:|| |:.|..:.
E. coli    67 EEGGIYSWMNNSVGPRFAFIGTFMWFSSYIIWMVSTSAKVWV--------PFSTFLYGSDMTQHW 123

  Fly   165 EGMGAYP----DLFAFVVTILFSLAIAVGAKESTRVNNV---------FTMLNLGVVLFVIIAGL 216
            ...|..|    .|.|....||.::..:.|..:..|:..|         ..:|.:.:.:.::..|.
E. coli   124 RIAGLEPTQVVGLLAVAWMILVTVVASKGINKIARITAVGGIAVMCLNLVLLLVSITILLLNGGH 188

  Fly   217 FKVSSSNWSIPKSQVPEGYGDGGFMPYGVSGIIKGAAVCFYGFIGFDCIATAGEEAKNPKKS--- 278
            |....:..:.|.    .||..|..|   :|.::  .|:..||  |.:.:....::.:||:|:   
E. coli   189 FAQDINFLASPN----PGYQSGLAM---LSFVV--FAIFAYG--GIEAVGGLVDKTENPEKNFAK 242

  Fly   279 -IPFAVIV-----SLAMIFLAYFGVSTVLTMMLP-------------------------YFEQDE 312
             |.||.||     ||| |||  :||||....:|.                         :...:.
E. coli   243 GIVFAAIVISIGYSLA-IFL--WGVSTNWQQVLSNGSVNLGNITYVLMKSLGMTLGNALHLSPEA 304

  Fly   313 KAPLPHVF-RINGWHVAEYVVSIGAMFGLCSSMMGAMF----------PLPRI-------VFAMS 359
            ...|...| ||.|  ::.::...||.|.||.|.:.|:.          |:.|:       :....
E. coli   305 SLSLGVWFARITG--LSMFLAYTGAFFTLCYSPLKAIIQGTPKALWPEPMTRLNAMGMPSIAMWM 367

  Fly   360 NDGLLFKFLGDISEKYKTPFKGTMITGMLTGILAAVFNLSQLVNMMSIGTLLAYSMVASCVLMLR 424
            ..||:..|:..:|      |.|        |..:|.||  :|..|.::...|.|..:|     |.
E. coli   368 QCGLVTVFILLVS------FGG--------GTASAFFN--KLTLMANVSMTLPYLFLA-----LA 411

  Fly   425 YEVDDRRESRIVANGRATGLEQDRPCALWRRIFNLNGQTVPTKQTSRIVTYSVTLFSLWCMVFSQ 489
            :.....|:            :.|||..:::           |..::.|.|..|.|...:..||:.
E. coli   412 FPFFKARQ------------DLDRPFVIFK-----------THLSAMIATVVVVLVVTFANVFTI 453

  Fly   490 ILTKFEEDLANVTSFDG-IKLVLGTIPLAVLLLVISRQPTSGV 531
            |     :.:.....:|. :.::.|.:..::|.:.|.:...|.|
E. coli   454 I-----QPVVEAGDWDSTLWMIGGPVFFSLLAMAIYQNYCSRV 491

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5535NP_649019.2 2A0303 20..585 CDD:273330 116/563 (21%)
yjeMNP_418580.2 PRK15238 1..493 CDD:237929 116/563 (21%)

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