DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5535 and cadB

DIOPT Version :10

Sequence 1:NP_649019.2 Gene:CG5535 / 39990 FlyBaseID:FBgn0036764 Length:630 Species:Drosophila melanogaster
Sequence 2:NP_418556.1 Gene:cadB / 948654 ECOCYCID:EG10132 Length:444 Species:Escherichia coli


Alignment Length:428 Identity:90/428 - (21%)
Similarity:168/428 - (39%) Gaps:92/428 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 AKVLSAFDLTALGIGSTLGVGVYVLAGEVSKQYAGPAVVVSFLIAAIASIFAGLCYAEFGARVPK 101
            ||.:..|..|.:..|:.:|.|:.:|...::.  .|...:..::|:.|.::.....||....:.|:
E. coli     4 AKKIGLFACTGVVAGNMMGSGIALLPANLAS--IGGIAIWGWIISIIGAMSLAYVYARLATKNPQ 66

  Fly   102 AGSAYIYSYVTIGEF---IAFLIG-----WNLILEYAIGSASVVKGLSTYLDQLCGNPMSSFLGT 158
            .|....|:    ||.   ..|..|     .|.|...|||..:|                 |:|.|
E. coli    67 QGGPIAYA----GEISPAFGFQTGVLYYHANWIGNLAIGITAV-----------------SYLST 110

  Fly   159 HMPLNIEGMGAYPDLFAFVVTILFSLAIAVGAKESTRVNNVFTMLNLGVVLFVIIAG--LFKVS- 220
            ..|:..:.:.|  .:....:..:|:....:|....:|:..:..:|.|..|:...|.|  .|..: 
E. coli   111 FFPVLNDPVPA--GIACIAIVWVFTFVNMLGGTWVSRLTTIGLVLVLIPVVMTAIVGWHWFDAAT 173

  Fly   221 -SSNWSIPKSQVPEGYGDGGFMPYGVSGIIKGAAVCFYGFIGFDCIATAGEEAKNPKKSIPFAVI 284
             ::||:  .:...:|:           .|||...:|.:.|:|.:..|.:....||||:::|.|.:
E. coli   174 YAANWN--TADTTDGH-----------AIIKSILLCLWAFVGVESAAVSTGMVKNPKRTVPLATM 225

  Fly   285 VSLAMIFLAYFGVSTVLTMMLPYFEQDEKAPLPHVFRINGWHVAEYVVSIGAMFG---------- 339
            :...:..:.|...:.||:.|.|          ..|...:|   |.:.:|...:.|          
E. coli   226 LGTGLAGIVYIAATQVLSGMYP----------SSVMAASG---APFAISASTILGNWAAPLVSAF 277

  Fly   340 ---LCSSMMGA-MFPLPRIVFAMSNDGLLFKFLGDISEKYKTPFKGTMITGM-LTG--ILAAVFN 397
               .|.:.:|: |..:.:.....:|||...|..|:: :....|.||.::..: :|.  ||..:.|
E. coli   278 TAFACLTSLGSWMMLVGQAGVRAANDGNFPKVYGEV-DSNGIPKKGLLLAAVKMTALMILITLMN 341

  Fly   398 ---------LSQLVNMMSIGTLLAYSMVASCVLMLRYE 426
                     ..:|..:..:.|:|.|  ..|||.::|:|
E. coli   342 SAGGKASDLFGELTGIAVLLTMLPY--FYSCVDLIRFE 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5535NP_649019.2 2A0303 20..585 CDD:273330 90/428 (21%)
cadBNP_418556.1 cadB 1..435 CDD:182458 90/428 (21%)

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